Gene
| Gene Model ID | pfu_aug1.0_4669.1_59573 |
|---|---|
| Locus | scaffold4669.1 : 1 ... 17045 : - |
| To GenomeBrowser | scaffold4669.1:1..17045 |
| Genes list of scaffold | scaffold4669.1 |
| Synonym | pfu_aug2.0_860.1_01198 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4669.1_59573.t1 | 3 | 1 | CRM1_C | 73 | 99 | 1.2e-37 | 129.5 | 0.57 | 2800.0 | -3.1 |
| pfu_aug1.0_4669.1_59573.t1 | 3 | 1 | Xpo1 | 83 | 118 | 2.4e-28 | 98.9 | 0.057 | 280.0 | 1.3 |
| pfu_aug1.0_4669.1_59573.t1 | 1 | 1 | IBN_N | 92 | 157 | 2.1e-12 | 46.7 | 1.1e-15 | 5.6e-12 | 45.4 |
| pfu_aug1.0_4669.1_59573.t1 | 3 | 2 | Xpo1 | 170 | 276 | 2.4e-28 | 98.9 | 2.7e-30 | 1.3e-26 | 93.2 |
| pfu_aug1.0_4669.1_59573.t1 | 3 | 2 | CRM1_C | 216 | 229 | 1.2e-37 | 129.5 | 0.43 | 2100.0 | -2.7 |
| pfu_aug1.0_4669.1_59573.t1 | 3 | 3 | CRM1_C | 391 | 493 | 1.2e-37 | 129.5 | 5.99994e-41 | 3.0e-37 | 128.2 |
| pfu_aug1.0_4669.1_59573.t1 | 3 | 3 | Xpo1 | 412 | 464 | 2.4e-28 | 98.9 | 0.0023 | 12.0 | 5.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4669.1_59573.t1 | gi|291231038|ref|XP_002735483.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4669.1_59573.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4669.1_59573.t1 atgttccagtttcaaccggttaccaaaattttgtatgcctttcttcgagttgacagtgaatgtggcagaagagaagtttc aggacaaagttatcaaagtcgcatttatccaatttccgagaattcagtgttcatgccacccatagcgatgagttcgggta acctaacagaggaagcatccaagctgctggactttaaccagaagctggacatcaacctgttagataatgttgtaactgtc atgtatactggtaatggaccacagcaacggacagcacaggaagttttgaccactctaaaggagcaccctgactcctggac tcgtgtagacacaatactagaatactctaataaccaacaaacaaagtactatgctctacagattctagaaaatgtcatca aaacaaagtggaaggtcttacctcgggctcaatgtgaaggaataaaaaagtacattgttggactcattattaagacttca tctgaggcagggacactagagaaagagaaagtttatttaggaaagctgaatatgattctagtacagattctgaagtatga atggcctcgtaactggccatcgtttatcagtgatatcgtaggggctagcaaaacaaatgagtctttgtgtcagaacaacc tagtgatacttaaacttctcagtgaagaggtgtttgactacagtagtggacagatgacacaagctaaagccaaacatctt aaagacagtatgtgtagtgaattctcctctatcttccagctctgtcagtttgtcatgtttctgaatgtgccaatgtttcg gaatatcactctgaagtgcctgacagaaattggtaaaacattgagcaaaataattatgagctcgcacattagtccatttt gcatctacgcgtctttgaagatatgtgtatataaagtgaaaaatcctataggggctgccgttgtagttggagcacagtac gatgaacagtttgtccatctgtttactctcacaatgacacaacttaaacagatgctgccattacaaacaaatctcaagga tgcgtatcagaggggaacagacgacgaacaaaagttcatccaaaacttgagtctctttatatgtacatacctcaaagaac acggatcactgatagagaagaaatcagatctacatgaaaatctgctagagctaggtagaatatacctggacatgttgaat gtttacaaggtaatgagtgagaacataagcagtgcaatagctacaaatggtgagacggtcaccaaacagccgttgatacg cagcatgagaacagtcaaaaaggaaacgttaaaactcatctccggctgggtcagccgatccaatgatccacaaatggtag cagagaatttcatccccccattattagatgcagtattacttgattaccagagaaacgtatcggcagctcgtgaaccagaa gttcttagtactatggcaactattgtcaacagattagag |
|
Protein
| Protein ID | pfu_aug1.0_4669.1_59573.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4669.1_59573.t1 MFQFQPVTKILYAFLRVDSECGRREVSGQSYQSRIYPISENSVFMPPIAMSSGNLTEEASKLLDFNQKLDINLLDNVVTV MYTGNGPQQRTAQEVLTTLKEHPDSWTRVDTILEYSNNQQTKYYALQILENVIKTKWKVLPRAQCEGIKKYIVGLIIKTS SEAGTLEKEKVYLGKLNMILVQILKYEWPRNWPSFISDIVGASKTNESLCQNNLVILKLLSEEVFDYSSGQMTQAKAKHL KDSMCSEFSSIFQLCQFVMFLNVPMFRNITLKCLTEIGKTLSKIIMSSHISPFCIYASLKICVYKVKNPIGAAVVVGAQY DEQFVHLFTLTMTQLKQMLPLQTNLKDAYQRGTDDEQKFIQNLSLFICTYLKEHGSLIEKKSDLHENLLELGRIYLDMLN VYKVMSENISSAIATNGETVTKQPLIRSMRTVKKETLKLISGWVSRSNDPQMVAENFIPPLLDAVLLDYQRNVSAAREPE VLSTMATIVNRLE |
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