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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4669.1_59573
Locus scaffold4669.1 : 1 ... 17045 : -
To GenomeBrowser scaffold4669.1:1..17045
Genes list of scaffold scaffold4669.1
Synonym pfu_aug2.0_860.1_01198

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4669.1_59573.t1 3 1 CRM1_C 73 99 1.2e-37 129.5 0.57 2800.0 -3.1
pfu_aug1.0_4669.1_59573.t1 3 1 Xpo1 83 118 2.4e-28 98.9 0.057 280.0 1.3
pfu_aug1.0_4669.1_59573.t1 1 1 IBN_N 92 157 2.1e-12 46.7 1.1e-15 5.6e-12 45.4
pfu_aug1.0_4669.1_59573.t1 3 2 Xpo1 170 276 2.4e-28 98.9 2.7e-30 1.3e-26 93.2
pfu_aug1.0_4669.1_59573.t1 3 2 CRM1_C 216 229 1.2e-37 129.5 0.43 2100.0 -2.7
pfu_aug1.0_4669.1_59573.t1 3 3 CRM1_C 391 493 1.2e-37 129.5 5.99994e-41 3.0e-37 128.2
pfu_aug1.0_4669.1_59573.t1 3 3 Xpo1 412 464 2.4e-28 98.9 0.0023 12.0 5.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4669.1_59573.t1 gi|291231038|ref|XP_002735483.1| 0.0

Transcript
Transcript IDpfu_aug1.0_4669.1_59573.t1
Definition-
>pfu_aug1.0_4669.1_59573.t1
atgttccagtttcaaccggttaccaaaattttgtatgcctttcttcgagttgacagtgaatgtggcagaagagaagtttc
aggacaaagttatcaaagtcgcatttatccaatttccgagaattcagtgttcatgccacccatagcgatgagttcgggta
acctaacagaggaagcatccaagctgctggactttaaccagaagctggacatcaacctgttagataatgttgtaactgtc
atgtatactggtaatggaccacagcaacggacagcacaggaagttttgaccactctaaaggagcaccctgactcctggac
tcgtgtagacacaatactagaatactctaataaccaacaaacaaagtactatgctctacagattctagaaaatgtcatca
aaacaaagtggaaggtcttacctcgggctcaatgtgaaggaataaaaaagtacattgttggactcattattaagacttca
tctgaggcagggacactagagaaagagaaagtttatttaggaaagctgaatatgattctagtacagattctgaagtatga
atggcctcgtaactggccatcgtttatcagtgatatcgtaggggctagcaaaacaaatgagtctttgtgtcagaacaacc
tagtgatacttaaacttctcagtgaagaggtgtttgactacagtagtggacagatgacacaagctaaagccaaacatctt
aaagacagtatgtgtagtgaattctcctctatcttccagctctgtcagtttgtcatgtttctgaatgtgccaatgtttcg
gaatatcactctgaagtgcctgacagaaattggtaaaacattgagcaaaataattatgagctcgcacattagtccatttt
gcatctacgcgtctttgaagatatgtgtatataaagtgaaaaatcctataggggctgccgttgtagttggagcacagtac
gatgaacagtttgtccatctgtttactctcacaatgacacaacttaaacagatgctgccattacaaacaaatctcaagga
tgcgtatcagaggggaacagacgacgaacaaaagttcatccaaaacttgagtctctttatatgtacatacctcaaagaac
acggatcactgatagagaagaaatcagatctacatgaaaatctgctagagctaggtagaatatacctggacatgttgaat
gtttacaaggtaatgagtgagaacataagcagtgcaatagctacaaatggtgagacggtcaccaaacagccgttgatacg
cagcatgagaacagtcaaaaaggaaacgttaaaactcatctccggctgggtcagccgatccaatgatccacaaatggtag
cagagaatttcatccccccattattagatgcagtattacttgattaccagagaaacgtatcggcagctcgtgaaccagaa
gttcttagtactatggcaactattgtcaacagattagag

Protein
Protein IDpfu_aug1.0_4669.1_59573.t1
Definition-
>pfu_aug1.0_4669.1_59573.t1
MFQFQPVTKILYAFLRVDSECGRREVSGQSYQSRIYPISENSVFMPPIAMSSGNLTEEASKLLDFNQKLDINLLDNVVTV
MYTGNGPQQRTAQEVLTTLKEHPDSWTRVDTILEYSNNQQTKYYALQILENVIKTKWKVLPRAQCEGIKKYIVGLIIKTS
SEAGTLEKEKVYLGKLNMILVQILKYEWPRNWPSFISDIVGASKTNESLCQNNLVILKLLSEEVFDYSSGQMTQAKAKHL
KDSMCSEFSSIFQLCQFVMFLNVPMFRNITLKCLTEIGKTLSKIIMSSHISPFCIYASLKICVYKVKNPIGAAVVVGAQY
DEQFVHLFTLTMTQLKQMLPLQTNLKDAYQRGTDDEQKFIQNLSLFICTYLKEHGSLIEKKSDLHENLLELGRIYLDMLN
VYKVMSENISSAIATNGETVTKQPLIRSMRTVKKETLKLISGWVSRSNDPQMVAENFIPPLLDAVLLDYQRNVSAAREPE
VLSTMATIVNRLE

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