Gene
| Gene Model ID | pfu_aug1.0_4670.1_30763 |
|---|---|
| Locus | scaffold4670.1 : 7818 ... 19095 : - |
| To GenomeBrowser | scaffold4670.1:7818..19095 |
| Genes list of scaffold | scaffold4670.1 |
| Synonym | pfu_aug2.0_325.1_17282 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4670.1_30763.t1 | 5 | 1 | WD40 | 5 | 19 | 9.9e-21 | 72.8 | 0.0004 | 0.98 | 9.4 |
| pfu_aug1.0_4670.1_30763.t1 | 5 | 2 | WD40 | 26 | 61 | 9.9e-21 | 72.8 | 0.0001 | 0.25 | 11.3 |
| pfu_aug1.0_4670.1_30763.t1 | 5 | 3 | WD40 | 69 | 105 | 9.9e-21 | 72.8 | 1.3e-09 | 3.2e-06 | 26.8 |
| pfu_aug1.0_4670.1_30763.t1 | 5 | 4 | WD40 | 113 | 148 | 9.9e-21 | 72.8 | 3.8e-07 | 0.00093 | 18.9 |
| pfu_aug1.0_4670.1_30763.t1 | 5 | 5 | WD40 | 164 | 178 | 9.9e-21 | 72.8 | 0.6 | 1500.0 | -0.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4670.1_30763.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4670.1_30763.t1 atgatagatagtcaggcaataactacggctggatatgatcataccatcaggttctggcaagctcacagtggaatctgtta cagaaccgtgcagcaccctgattctcaagtaaatgccttggagattactccagataaacagcttctggctgcttcgggat atcagcacattcgtatgtatgacctgaattccaacaatccaaaccccgttataaactatgacggcatctccaaaaatgtc actggtgtaggatttcaagaagatggtaaatggatgtacacaggaggggaagataactctgtcagaatttgggacctacg gtcaagaaatctacagtgtcagaagatatttcaagttgatgcacctgttaattgtgtttgccttcacccaaatcagggtg aactgttcattggagaccaaagtggttcaatccatgtatgggatctgaaaacgaacaacaatgaacatttgattcctgag aaggatgcctcaatacagagtataagtatagatcccatgggaacaatgatggcagctacaaataacaagaatttcacgaa accttgcaggaagcaagaactcaagctcctctaccaagtttgtgtttttcatgccaaacagtcaacaaatatggccgcag agggctctaattggctgacacattttcgacttctcctctgcaagagctgcacagaatttcacaaaacctga |
|
Protein
| Protein ID | pfu_aug1.0_4670.1_30763.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4670.1_30763.t1 MIDSQAITTAGYDHTIRFWQAHSGICYRTVQHPDSQVNALEITPDKQLLAASGYQHIRMYDLNSNNPNPVINYDGISKNV TGVGFQEDGKWMYTGGEDNSVRIWDLRSRNLQCQKIFQVDAPVNCVCLHPNQGELFIGDQSGSIHVWDLKTNNNEHLIPE KDASIQSISIDPMGTMMAATNNKNFTKPCRKQELKLLYQVCVFHAKQSTNMAAEGSNWLTHFRLLLCKSCTEFHKT |
|