Gene
| Gene Model ID | pfu_aug1.0_4670.1_30764 |
|---|---|
| Locus | scaffold4670.1 : 19226 ... 22321 : + |
| To GenomeBrowser | scaffold4670.1:19226..22321 |
| Genes list of scaffold | scaffold4670.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4670.1_30764.t1 | 1 | 1 | Fe_hyd_lg_C | 2 | 43 | 1.5e-16 | 60.4 | 2.8e-20 | 2.1e-16 | 60.0 |
| pfu_aug1.0_4670.1_30764.t1 | 1 | 1 | Fe_hyd_SSU | 52 | 103 | 2.3e-08 | 33.9 | 3.8e-12 | 2.9e-08 | 33.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4670.1_30764.t1 | gi|115613918|ref|XP_001191432.1| | 2.0e-40 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4670.1_30764.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4670.1_30764.t1 atggcgttagcgtatggattccgcaatattcaaaatatcgtgcagaaagtcaaacgtggaaaatgcccttatcactttgt agaaataatggcgtgtccgtcaggatgtaataatggtggaggtcaaatacggcctgatgacggggagaacaataaagaca gacttcaaacggtgacagatttatataactcaatgccaagtgtaacaccagacaattatagtggtgtaatggatgtttac aatgagtggttaggtgggttcggctcagagaaggcaagaactatacttcacacccagtatcatgaagtagagaaaatgac aaacgctctggcaattaaatggtga |
|
Protein
| Protein ID | pfu_aug1.0_4670.1_30764.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4670.1_30764.t1 MALAYGFRNIQNIVQKVKRGKCPYHFVEIMACPSGCNNGGGQIRPDDGENNKDRLQTVTDLYNSMPSVTPDNYSGVMDVY NEWLGGFGSEKARTILHTQYHEVEKMTNALAIKW |
|