Gene
| Gene Model ID | pfu_aug1.0_4671.1_37940 |
|---|---|
| Locus | scaffold4671.1 : 45655 ... 71235 : - |
| To GenomeBrowser | scaffold4671.1:45655..71235 |
| Genes list of scaffold | scaffold4671.1 |
| Synonym | pfu_aug2.0_511.1_04267 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4671.1_37940.t1 | 2 | 1 | MIF4G | 473 | 593 | 6.6e-28 | 97.5 | 7.4e-20 | 5.5e-16 | 58.6 |
| pfu_aug1.0_4671.1_37940.t1 | 2 | 2 | MIF4G | 625 | 690 | 6.6e-28 | 97.5 | 2.0e-13 | 1.5e-09 | 37.6 |
| pfu_aug1.0_4671.1_37940.t1 | 1 | 1 | Upf2 | 704 | 863 | 9.4e-28 | 97.1 | 1.3e-31 | 9.4e-28 | 97.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4671.1_37940.t1 | gi|291233414|ref|XP_002736648.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4671.1_37940.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4671.1_37940.t1 atgagtgacagtaggtctggaaaagcaacaacagaaagtacctctaaaagtgaaagtagtagatcaactccacgtaaata tgatgacagaggaggaggtgctcgtggaaggtacgaggatgatcggtcttactctggacgaggtcgttctaactacgatg acgacagacctcgctataaagggcgatcaggatatgacgatagacctcgttccagccggggaaagtatgactcctatgat gatagagtaggagggtcgggaaggagtaaaggtatagatgatgatagatcgtatggtggtagaggaagatatgacgatga tgacaggtactatagtgataaacgaaggtcagatgtcaaggacagtccaactaagagtgtgaaaagtgaaagtaggagga ccacaggacatgaaggtcataaagataaaagtaggagtgagaattatagtagtgaaggggacagaggaagtagcaaaaaa tcaagtgacagaaacaccccaaggagtggtgacaaaggttcatctaggtcagataagccagccctgggatcacacaggag taacaaaggatcaggggatgccaaagataaatctcagaaattattaaaagaaaaagataaagtagagaaaaaggaatcac aaagttcaaaagataaatcggagacagatagaggttctaaaactacagcaggaaatatcaaggtgtcagaggtcaaatca gctgctgacttagaggctcagtggcagaaagaggaggaggaaaaaagaaaaaggaggaagaagaaaagagaagacaggaa gagattaaaaggaaagaagaggaggaaaagactttttttacagagaaaagcagaggaggaagctgagagaaagatcgctg aggaaaagaaatcgatagatgactttatcaaagaatctaaagacagaaatgaattgaaagaaaaacttcgacaagaaaat caaaaagcagcagattccagaaaagatgaagaagctggatttgacatcttcaatcctgagaaaagtgcagagtttcagta tgtgggagacagtacactgtttgaagatgaggatgctagaactttctatgagacgttacctgatctcaaatctttcattc ctgggatttgttataaagacagtgaacaagccgccgggaaagatgaaacaaaggaatctgaggatgacttggtggaagac ctagagaatttacaaatagaagatgtggagagagagatggaaacagagcaacagatagcggaagtagagagtaaagaagc agagaaaacccaggacggagagacctctgtaaaccaggaggaagaggtccgagatatagactatgacctactaccagagg cagatgaggatgattcagatacaggaagtcttatgaagatgcagtttgaagcctacgtacaatctctgcctaactgtgtc aacagggaactcatagataaggtccgaaagaaggatcagattaacatagaatccaaactgaagactgtcagatttatagg agaactggtcaaattcaaattgtttccaaagtctgaagctttacattgtttgaagatgctgatgtttgacttttcccatc ataatatagagatggcgtgtgctttactagacacatgtggaaggttcctatacaggtctcaggactcccatcatagaacc aaaatatacttagacattatgatgagaaagaagtcgtcattacatttggagagtcggtacactacgatgatagagaatgc cttctactacagtaatcccccagaaaccacacagatagtgaggaaagtacgacctccgctacacgaatacatcaggaaac tactgtacaaagacttgtctaaggtcaccacagaaaaggagcatgtagctatccaggttgtggatggtgtattggaggat atcagacttggcatggagataaatcatcccaaatataaccagcgtcgtgtgagctgtgctaagttcctaggagagctata taactacagaatggtggaatctgccgttatatttaaaactttgtattccttcatcacatttggggtttcacttgatggtg cctctggggaggagttgagtggacatgaggtagatgagagccaggatagcatggaggagtccagtcagaggagccgagag gaggatgagagtgaaggagagaggaatggggaggaggaagaggaagatataatggaatcagcaggagaaatggaggatga agatgagattatgttactaacaggaggacctaaacacatgaagtgtgctgaggatgacgattttatggcagcttttgaca agatgatgaatgacaatatacaggctagaaccaatgaatcattgaaagttccccaacttgatatagctgttcccatgcat ctcaaagacaagagtaaaaagacagcaacaaatgtaaacttgtatgtaactgaagaagaaatacctgtacagaatgagaa aaatgccatagagtttgtactgatgaccaggaaagggaataaacaacagttcaccaatctgaatgtaccaatatctgccg agtttgcagccaaatacaaagaacgagaactggtcagtatatga |
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Protein
| Protein ID | pfu_aug1.0_4671.1_37940.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4671.1_37940.t1 MSDSRSGKATTESTSKSESSRSTPRKYDDRGGGARGRYEDDRSYSGRGRSNYDDDRPRYKGRSGYDDRPRSSRGKYDSYD DRVGGSGRSKGIDDDRSYGGRGRYDDDDRYYSDKRRSDVKDSPTKSVKSESRRTTGHEGHKDKSRSENYSSEGDRGSSKK SSDRNTPRSGDKGSSRSDKPALGSHRSNKGSGDAKDKSQKLLKEKDKVEKKESQSSKDKSETDRGSKTTAGNIKVSEVKS AADLEAQWQKEEEEKRKRRKKKREDRKRLKGKKRRKRLFLQRKAEEEAERKIAEEKKSIDDFIKESKDRNELKEKLRQEN QKAADSRKDEEAGFDIFNPEKSAEFQYVGDSTLFEDEDARTFYETLPDLKSFIPGICYKDSEQAAGKDETKESEDDLVED LENLQIEDVEREMETEQQIAEVESKEAEKTQDGETSVNQEEEVRDIDYDLLPEADEDDSDTGSLMKMQFEAYVQSLPNCV NRELIDKVRKKDQINIESKLKTVRFIGELVKFKLFPKSEALHCLKMLMFDFSHHNIEMACALLDTCGRFLYRSQDSHHRT KIYLDIMMRKKSSLHLESRYTTMIENAFYYSNPPETTQIVRKVRPPLHEYIRKLLYKDLSKVTTEKEHVAIQVVDGVLED IRLGMEINHPKYNQRRVSCAKFLGELYNYRMVESAVIFKTLYSFITFGVSLDGASGEELSGHEVDESQDSMEESSQRSRE EDESEGERNGEEEEEDIMESAGEMEDEDEIMLLTGGPKHMKCAEDDDFMAAFDKMMNDNIQARTNESLKVPQLDIAVPMH LKDKSKKTATNVNLYVTEEEIPVQNEKNAIEFVLMTRKGNKQQFTNLNVPISAEFAAKYKERELVSI |
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