Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4672.1_16468
Locus scaffold4672.1 : 58986 ... 64605 : +
To GenomeBrowser scaffold4672.1:58986..64605
Genes list of scaffold scaffold4672.1
Synonym pfu_aug2.0_772.1_07861

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4672.1_16468.t1 1 1 7tm_1 67 314 1.2e-19 70.4 2.1e-23 1.6e-19 70.1

Transcript
Transcript IDpfu_aug1.0_4672.1_16468.t1
Definition-
>pfu_aug1.0_4672.1_16468.t1
atggcgacaaccgctgactataccttcacggcaaacataacggtcaacgtgacaggtaacctaacagactcgaacgtgac
aggaaggcgtcgtttctacttccgtaactacaagcacgagtatgacctcatatccgatcgttacaaaaacggcatcatca
ccgcaggctccctgaacgccagctttgctatagcagttaatcttatattgcttgtaaccattctaagcaaccgagcattg
cgaagatcgatgttctattggaacataatcagcctctgtatttgcggtctgttcagtgggttcatcatcgtaccctttac
aacaaataagttccatctagagaagtggctgcatggaggagaattttgtcaggtatttgcccttctagattatacacaag
tagccttgccgggaactatcttcatttgtatgcaaattgacagattcatcaagttgcgcatgcgcggacgtccaacgatc
aatcttgggtgtaggattgtgcagactattttgtttgttttcccgtggcttttcattcttgtcgtctgcgttcctttact
tgttgtcggaaagagcgactacggcagaattttccaacgatttcaagaagaatattgctttcacatactgaagcgggagt
attacaagattctcctttacatgatgttatttggaccaatctctctcttgatcgttttctccattgtgagcttcatcaat
ttgaaattgacagaatcaaaatggaaacgaatgtcagaggcggagagtaaatccagagatcttgattctaccaggtctac
ttccaaaacaaccattatagcaacggttatttttgtacttttctggcttccatttgtcggtactcttctgacaatacaga
tttgttctactctaagaaaaagaggctgcttccccaaggaaatagtttatcttgcctcctattcatgcggagcgatggcg
tcttacatgaggcagataccttggtttcttctaccggacatgcgcgcaagtgctactgagcttgcgcaaaatacctcttc
cggcatcatgagaaaagtgaatgttgtgaggaaatacatttccaacgaaccattgattgtagaatggtcatctaaacaga
cagaaatcatgcaagagaaaacagaaaatcttgattctgacacgaaaaggatctag

Protein
Protein IDpfu_aug1.0_4672.1_16468.t1
Definition-
>pfu_aug1.0_4672.1_16468.t1
MATTADYTFTANITVNVTGNLTDSNVTGRRRFYFRNYKHEYDLISDRYKNGIITAGSLNASFAIAVNLILLVTILSNRAL
RRSMFYWNIISLCICGLFSGFIIVPFTTNKFHLEKWLHGGEFCQVFALLDYTQVALPGTIFICMQIDRFIKLRMRGRPTI
NLGCRIVQTILFVFPWLFILVVCVPLLVVGKSDYGRIFQRFQEEYCFHILKREYYKILLYMMLFGPISLLIVFSIVSFIN
LKLTESKWKRMSEAESKSRDLDSTRSTSKTTIIATVIFVLFWLPFVGTLLTIQICSTLRKRGCFPKEIVYLASYSCGAMA
SYMRQIPWFLLPDMRASATELAQNTSSGIMRKVNVVRKYISNEPLIVEWSSKQTEIMQEKTENLDSDTKRI

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495