Gene
| Gene Model ID | pfu_aug1.0_4680.1_30766 |
|---|---|
| Locus | scaffold4680.1 : 804 ... 22643 : + |
| To GenomeBrowser | scaffold4680.1:804..22643 |
| Genes list of scaffold | scaffold4680.1 |
| Synonym | pfu_aug2.0_4.1_13346 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4680.1_30766.t1 | 2 | 1 | EF-hand_8 | 27 | 71 | 2.1e-11 | 43.2 | 1.6e-09 | 3.3e-06 | 26.6 |
| pfu_aug1.0_4680.1_30766.t1 | 2 | 1 | EF-hand_7 | 28 | 70 | 2.6e-11 | 43.4 | 3.0e-07 | 0.00064 | 19.8 |
| pfu_aug1.0_4680.1_30766.t1 | 2 | 1 | EF-hand_1 | 50 | 71 | 2.6e-14 | 51.3 | 1.0e-08 | 2.2e-05 | 23.4 |
| pfu_aug1.0_4680.1_30766.t1 | 2 | 1 | EF-hand_6 | 50 | 71 | 1.6e-11 | 43.0 | 8.4e-06 | 0.018 | 14.9 |
| pfu_aug1.0_4680.1_30766.t1 | 2 | 1 | EF-hand_5 | 51 | 71 | 2.7e-08 | 32.7 | 3.1e-06 | 0.0067 | 15.7 |
| pfu_aug1.0_4680.1_30766.t1 | 2 | 2 | EF-hand_8 | 82 | 110 | 2.1e-11 | 43.2 | 2.2e-05 | 0.046 | 13.3 |
| pfu_aug1.0_4680.1_30766.t1 | 2 | 2 | EF-hand_1 | 85 | 110 | 2.6e-14 | 51.3 | 1.8e-09 | 3.9e-06 | 25.7 |
| pfu_aug1.0_4680.1_30766.t1 | 2 | 2 | EF-hand_6 | 85 | 110 | 1.6e-11 | 43.0 | 2.5e-09 | 5.3e-06 | 25.8 |
| pfu_aug1.0_4680.1_30766.t1 | 2 | 2 | EF-hand_7 | 86 | 114 | 2.6e-11 | 43.4 | 1.8e-07 | 0.00038 | 20.5 |
| pfu_aug1.0_4680.1_30766.t1 | 2 | 2 | EF-hand_5 | 86 | 108 | 2.7e-08 | 32.7 | 1.1e-06 | 0.0022 | 17.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4680.1_30766.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4680.1_30766.t1 atgaacgaatacgatctaacgaaggaagacttggagggtttgaaagcaggtttcaacgacaaatgcacaagggcacgcgt actgactaaaacagaattccgggaattatacggcagtctttttcccggtgacgcagtggaatatgccgatgaaatgttcc gtattgccgataccgatgataacggacaagtagattttacggaatttgtacgaagcctgtgtttgtgtgacagtaaaaat atcgacgataaaatcaagatagcattcaaactatacgacagggacaacagtggcaccatcagcaaagcggaggtcagaga ccttttgaagcttggtttaaaatacagtgagattttaagatgtcttagcgaattgcatggtatcttcattagtctccgaa cattgaagagaatgactcagaatttaggactcttccgacgaaaaaaccatagcgatattttagaaatcgccatgtttgtt ttacaacaatgtgatattcatggtaaaatgcatggctatcgctggatgcacttaaaatgcattgaaaagggatttgtggt aagtcaggaaacaattagagttttgttacatatccttgatccggaaggaataaacttgagaaagagacgacgactcagac gacgtacatattcagtcccagggccaaatgtagtctggcacatagatggatatgacaagttgtcacgttatggaattaag attcatggatgtgtagatggattttctcgtcagataatttggttgaaagctgatgttacaaacaagaacccaaatgtaat tgcaaagtattacattgaaagcataaagaatcatggcatatacccaagacgaatcagagcagacatgggaacagaaaatg tccacatcgaagttgtacaaaaatttttacgacgtgaccatcgagacgaatttgcaggtgaaaaaagttttatatacgga aagagtacgatgaatcagagaattgagtgtttatggtgcatggttcgtcggcagggcatacaatactggatgaatttttt ccaggatttaactgaggctgaattacacgatggcggatatttagatcaagaactctccaggttttgtttccttggaatgg ttcaggatacgcttgatgatatcagatgtgtttggaatcgacacagaataagaccttatcggcaaagaaaccacataagc ggaaggccatttatgctgtattttatgccatcaatgtgttctgccatggattatggcttggaacaaaattcaaatgacgt acaaatttgcgaagaagaaattgattcagtgccaacacttccatgtagtgatttgataaaagatctttgtgtttgtatca tgcaggagaaccaaattactttacctgaaaacccaaaggatatgagagacttatacatcttccttagagaagacatcaat aatagtttgtaa |
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Protein
| Protein ID | pfu_aug1.0_4680.1_30766.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4680.1_30766.t1 MNEYDLTKEDLEGLKAGFNDKCTRARVLTKTEFRELYGSLFPGDAVEYADEMFRIADTDDNGQVDFTEFVRSLCLCDSKN IDDKIKIAFKLYDRDNSGTISKAEVRDLLKLGLKYSEILRCLSELHGIFISLRTLKRMTQNLGLFRRKNHSDILEIAMFV LQQCDIHGKMHGYRWMHLKCIEKGFVVSQETIRVLLHILDPEGINLRKRRRLRRRTYSVPGPNVVWHIDGYDKLSRYGIK IHGCVDGFSRQIIWLKADVTNKNPNVIAKYYIESIKNHGIYPRRIRADMGTENVHIEVVQKFLRRDHRDEFAGEKSFIYG KSTMNQRIECLWCMVRRQGIQYWMNFFQDLTEAELHDGGYLDQELSRFCFLGMVQDTLDDIRCVWNRHRIRPYRQRNHIS GRPFMLYFMPSMCSAMDYGLEQNSNDVQICEEEIDSVPTLPCSDLIKDLCVCIMQENQITLPENPKDMRDLYIFLREDIN NSL |
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