Gene
| Gene Model ID | pfu_aug1.0_4680.1_30767 |
|---|---|
| Locus | scaffold4680.1 : 27348 ... 32985 : - |
| To GenomeBrowser | scaffold4680.1:27348..32985 |
| Genes list of scaffold | scaffold4680.1 |
| Synonym | pfu_aug2.0_4.1_13345 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4680.1_30767.t1 | 1 | 1 | HECT | 475 | 628 | 1.7e-07 | 30.7 | 3.9e-10 | 5.7e-06 | 25.7 |
Transcript
| Transcript ID | pfu_aug1.0_4680.1_30767.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4680.1_30767.t1 atgaggggcatgacagacaacgacctggccgaattccttccgaataagggagatatatttgctttgagaagttttctgtc aaacaaattaagtgacacaaaatcaaaaaagctaagccttatggacaaactacgtgatcgccttgaaactaccagaaata gcaaacgcccttcgaaagacgatgaagtatcatctagaaaaaaaattccaaaatttaacgcaaagaaacaagttcataga gttgacttgggctggtaccattttaatgagactaaaggttcgtactctcaagttagagaaaaattcggaggtgggaccag aactctactattagataagaagatgaacaagacagccgttatacagaaatgccttgaattatttttcccagacggagaaa gtagacatgggtctctatcagatatgatcgtcgatctaacagacttccaactaaaaccattaccggacgaagcaacgaca attggagatatgatagacaaggctaaattacataagattcgattttacttgaatacaaagatgaaaaagacaaatagttc agaaaaggtagagattgaagacgaagaaatgcccgtactgaaatttaaaaaaagttcagcaagaacatattctgacgaaa aagagtttgagatacaggtaccagaggaaggaaatagtgtagaaaaccagaatacagttatcataccatcaacatcaact ccagtgcattcagattcaacgcccatgcaagacttaagctcgaatacagaacaatcctatatttatattgaaaatgatat aaatggttatgacagtattcatacagatggagcttatacattagatataccaaatgtgtgggaagacagtctcggagaag tcgcttttacacgtgttttgccgacattgccggttagagatccaagaaagtttgacatagtggtacatagaggacacatg ctacaagatcttatcacgtttttcaaggacaacactgacgtagatttcagaatcgacaccatatctgtacagataatcct cccaaatggagacaaagaacaagcctatgatgatggaggggtgatgagagacatgttgacggaattttgggcagactttt atgagcaatgcacaactggacaaaccataagagtaccatgtttgcgccatgatttccaacaaaatgactggaaggcagtt gcaaggattcttgcaatgggatggattatgcagaggatgctaccaataaggctggcaccgagttttctgaaatcgtcttt gtttggttcagcgtcagaaagtgtgagagaggaatttcttttgtttattcctcctggggaacagaaaattctaaaagatg ccattgaaaaattcgattcggtggaccaggatgagttgattgaggttttgtccatacatgaaagcaaggtgagagcgaca aatgaaaatatagggacagtcgtagatcaaatagctcacttggaacttgtacaggagacagcgtttgtcagggagtgttt ctttgaagtattgatgcttttcgctttgaatatagatgtggatctagagtacagtaagatggaaccatcgtccaagaaga tattgtctattcttgtttgtgaagagtcagaatcggaatcgtttaaacatctgaaaagatacattagagagatggacacc gatttaaaaatgctgcgttgctttcttagattcgtcacggcaagcgacttgcttctgtatgacaaatacggaaaatacca tacaataactgtcaatttggtggacttgaccggtatatcaagaaggcccgttgctcacacttgtgggcgtgttcttgaga tccccaaaacgtatgaaagctatgtcattttcaagtgtgaaatgaatgctgttctaaacagcaacgtctgggtaatggac atagcatag |
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Protein
| Protein ID | pfu_aug1.0_4680.1_30767.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4680.1_30767.t1 MRGMTDNDLAEFLPNKGDIFALRSFLSNKLSDTKSKKLSLMDKLRDRLETTRNSKRPSKDDEVSSRKKIPKFNAKKQVHR VDLGWYHFNETKGSYSQVREKFGGGTRTLLLDKKMNKTAVIQKCLELFFPDGESRHGSLSDMIVDLTDFQLKPLPDEATT IGDMIDKAKLHKIRFYLNTKMKKTNSSEKVEIEDEEMPVLKFKKSSARTYSDEKEFEIQVPEEGNSVENQNTVIIPSTST PVHSDSTPMQDLSSNTEQSYIYIENDINGYDSIHTDGAYTLDIPNVWEDSLGEVAFTRVLPTLPVRDPRKFDIVVHRGHM LQDLITFFKDNTDVDFRIDTISVQIILPNGDKEQAYDDGGVMRDMLTEFWADFYEQCTTGQTIRVPCLRHDFQQNDWKAV ARILAMGWIMQRMLPIRLAPSFLKSSLFGSASESVREEFLLFIPPGEQKILKDAIEKFDSVDQDELIEVLSIHESKVRAT NENIGTVVDQIAHLELVQETAFVRECFFEVLMLFALNIDVDLEYSKMEPSSKKILSILVCEESESESFKHLKRYIREMDT DLKMLRCFLRFVTASDLLLYDKYGKYHTITVNLVDLTGISRRPVAHTCGRVLEIPKTYESYVIFKCEMNAVLNSNVWVMD IA |
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