Gene
| Gene Model ID | pfu_aug1.0_4689.1_45005 |
|---|---|
| Locus | scaffold4689.1 : 56546 ... 64920 : + |
| To GenomeBrowser | scaffold4689.1:56546..64920 |
| Genes list of scaffold | scaffold4689.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4689.1_45005.t1 | 1 | 1 | Sec23_trunk | 205 | 306 | 8.2e-30 | 103.9 | 7.3e-34 | 1.1e-29 | 103.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4689.1_45005.t1 | gi|301770043|ref|XP_002920444.1| | PREDICTED: protein transport protein Sec24C [Ailuropoda melanoleuca] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4689.1_45005.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4689.1_45005.t1 atgccccctggtccaactaagccaattcaaggtccacctgggaatcagtttcagaggcctccatcaaactttggtggacc agggtctaacccacccacaagcttccctggtccaggatctgggccaccaaacaatataggaggtcccggcaccggcccac cttctaattttggtacaggtccacccacaaatatgggaggccctggtgcgggcccaccatcaaacttttctggacctggg accgggccacctaccagctttgcaggtccaaattctggtctacagaacagctttccgggccctggatcaggccctcctac aggaatgatgggaggtaaaaatccaaggatgccgcctccagcttcccagccagggcaacagttgccaaaccagatgggag cactcagtatctctggaggtccaagaggtcctacaccagggggtgcacctcctcctaatatgggtaaaccaggtatgcct ccagtgccagcagagtacttccagcatctagatcacacagggaggagggtggattgttatgacagacctgaactctgttt aggatcttatgaatttgttgctacaaaagattattgtaaaaatggcgtaatgcccaagcctccagccttcattttcatga ttgatgtatcatataatgcagttaaaagtggtttaaccaatctgatatgtgagagattaaaagacgatgtccttgttaat ctaccaaaggaatctggtgctgatgagtctgaaatacgtgttggttttgtgacatatgcaaaagaaattcatttttataa tgtcaagggcagtttagcacaaccccagatgttagtagtgtcggatttagatgatgtatttgtacctttgttagatggtt ttctagttacactttcagaatcagaagctgtgattgacagacgtcgcttcaatgtcggaggtctgtcgactcaccggagg aaatatgtataa |
|
Protein
| Protein ID | pfu_aug1.0_4689.1_45005.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4689.1_45005.t1 MPPGPTKPIQGPPGNQFQRPPSNFGGPGSNPPTSFPGPGSGPPNNIGGPGTGPPSNFGTGPPTNMGGPGAGPPSNFSGPG TGPPTSFAGPNSGLQNSFPGPGSGPPTGMMGGKNPRMPPPASQPGQQLPNQMGALSISGGPRGPTPGGAPPPNMGKPGMP PVPAEYFQHLDHTGRRVDCYDRPELCLGSYEFVATKDYCKNGVMPKPPAFIFMIDVSYNAVKSGLTNLICERLKDDVLVN LPKESGADESEIRVGFVTYAKEIHFYNVKGSLAQPQMLVVSDLDDVFVPLLDGFLVTLSESEAVIDRRRFNVGGLSTHRR KYV |
|