Gene
| Gene Model ID | pfu_aug1.0_46935.1_41393 |
|---|---|
| Locus | scaffold46935.1 : 1 ... 3797 : + |
| To GenomeBrowser | scaffold46935.1:1..3797 |
| Genes list of scaffold | scaffold46935.1 |
| Synonym | pfu_aug2.0_108.1_26864 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_46935.1_41393.t1 | 8 | 1 | zf-H2C2_2 | 5 | 31 | 0.0 | 203.6 | 1.8e-06 | 0.0026 | 17.9 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 1 | zf-C2H2 | 5 | 13 | 2.7e-22 | 77.6 | 0.4 | 590.0 | 1.1 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 1 | zf-H2C2_5 | 6 | 13 | 3.1e-24 | 83.6 | 0.59 | 880.0 | 0.4 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 2 | zf-H2C2_5 | 22 | 43 | 3.1e-24 | 83.6 | 9.3e-05 | 0.14 | 12.4 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 2 | zf-C2H2 | 22 | 43 | 2.7e-22 | 77.6 | 0.001 | 1.5 | 9.2 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 1 | zf-C2H2_4 | 22 | 43 | 2.5e-15 | 55.5 | 3.5e-06 | 0.0052 | 17.0 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 1 | C1_3 | 22 | 28 | 3.1e-07 | 30.2 | 0.044 | 66.0 | 3.6 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 2 | zf-H2C2_2 | 35 | 58 | 0.0 | 203.6 | 2.0e-12 | 2.9e-09 | 36.7 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 2 | C1_3 | 48 | 56 | 3.1e-07 | 30.2 | 0.092 | 140.0 | 2.6 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 3 | zf-H2C2_5 | 49 | 71 | 3.1e-24 | 83.6 | 2.4e-05 | 0.035 | 14.3 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 3 | zf-C2H2 | 49 | 71 | 2.7e-22 | 77.6 | 0.00027 | 0.4 | 11.1 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 2 | zf-C2H2_4 | 49 | 71 | 2.5e-15 | 55.5 | 0.0016 | 2.4 | 8.6 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 3 | zf-H2C2_2 | 63 | 88 | 0.0 | 203.6 | 3.8e-10 | 5.7e-07 | 29.5 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 3 | C1_3 | 76 | 85 | 3.1e-07 | 30.2 | 0.042 | 63.0 | 3.7 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 4 | zf-H2C2_5 | 77 | 99 | 3.1e-24 | 83.6 | 0.0016 | 2.4 | 8.5 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 4 | zf-C2H2 | 77 | 99 | 2.7e-22 | 77.6 | 0.00055 | 0.81 | 10.1 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 3 | zf-C2H2_4 | 77 | 99 | 2.5e-15 | 55.5 | 0.0021 | 3.2 | 8.3 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 4 | zf-H2C2_2 | 92 | 115 | 0.0 | 203.6 | 1.2e-10 | 1.8e-07 | 31.1 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 4 | C1_3 | 102 | 112 | 3.1e-07 | 30.2 | 0.00023 | 0.34 | 10.9 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 5 | zf-H2C2_5 | 105 | 127 | 3.1e-24 | 83.6 | 2.4e-07 | 0.00035 | 20.6 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 5 | zf-C2H2 | 105 | 127 | 2.7e-22 | 77.6 | 1.6e-06 | 0.0024 | 18.1 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 4 | zf-C2H2_4 | 105 | 127 | 2.5e-15 | 55.5 | 4.4e-05 | 0.066 | 13.5 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 5 | zf-H2C2_2 | 119 | 143 | 0.0 | 203.6 | 6.0e-11 | 8.9e-08 | 32.0 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 5 | C1_3 | 131 | 140 | 3.1e-07 | 30.2 | 0.012 | 18.0 | 5.4 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 6 | zf-H2C2_5 | 133 | 155 | 3.1e-24 | 83.6 | 1.1e-07 | 0.00016 | 21.7 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 6 | zf-C2H2 | 133 | 155 | 2.7e-22 | 77.6 | 1.0e-07 | 0.00015 | 21.8 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 5 | zf-C2H2_4 | 133 | 155 | 2.5e-15 | 55.5 | 3.5e-06 | 0.0053 | 17.0 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 6 | zf-H2C2_2 | 147 | 171 | 0.0 | 203.6 | 2.0e-09 | 2.9e-06 | 27.2 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 6 | C1_3 | 160 | 169 | 3.1e-07 | 30.2 | 0.038 | 57.0 | 3.8 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 7 | zf-H2C2_5 | 161 | 183 | 3.1e-24 | 83.6 | 3.2e-06 | 0.0047 | 17.0 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 7 | zf-C2H2 | 161 | 183 | 2.7e-22 | 77.6 | 3.4e-06 | 0.005 | 17.1 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 6 | zf-C2H2_4 | 161 | 183 | 2.5e-15 | 55.5 | 0.0019 | 2.8 | 8.4 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 7 | zf-H2C2_2 | 176 | 196 | 0.0 | 203.6 | 2.6e-10 | 3.8e-07 | 30.0 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 7 | C1_3 | 186 | 197 | 3.1e-07 | 30.2 | 3.1e-05 | 0.046 | 13.7 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 8 | zf-H2C2_5 | 189 | 211 | 3.1e-24 | 83.6 | 1.0e-06 | 0.0015 | 18.6 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 8 | zf-C2H2 | 189 | 211 | 2.7e-22 | 77.6 | 3.2e-07 | 0.00048 | 20.3 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 7 | zf-C2H2_4 | 189 | 211 | 2.5e-15 | 55.5 | 4.3e-06 | 0.0063 | 16.7 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 8 | zf-H2C2_2 | 203 | 228 | 0.0 | 203.6 | 3.3e-13 | 4.9e-10 | 39.1 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 8 | C1_3 | 215 | 224 | 3.1e-07 | 30.2 | 0.02 | 30.0 | 4.7 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 9 | zf-H2C2_5 | 217 | 239 | 3.1e-24 | 83.6 | 0.0011 | 1.6 | 9.1 |
| pfu_aug1.0_46935.1_41393.t1 | 9 | 9 | zf-C2H2 | 217 | 239 | 2.7e-22 | 77.6 | 9.3e-05 | 0.14 | 12.5 |
| pfu_aug1.0_46935.1_41393.t1 | 8 | 8 | zf-C2H2_4 | 217 | 239 | 2.5e-15 | 55.5 | 0.0011 | 1.6 | 9.2 |
Transcript
| Transcript ID | pfu_aug1.0_46935.1_41393.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_46935.1_41393.t1 ccgtttacggagcaagtttaaaagtacacctgaagatacacaacaaggataaggagtataatgtgaaatgtgatatatgt gacttcagaactttcaactattgtaatttaagaagccattacagaaagcatactggggagaaaccgtttaagtgtgattt atgtgactacagagctgcatttaaaaacaatcttagaatgcatcagctactacatactggagaaaaaccgttcaagtgtg atatgtgtgactttacggcagcgcacacaaccactctgaccattcataaacgccaacacactggagaaaagccctataaa tgtgatgaatgtgatttcaggactaagcagagatctcatctaaagacacataaaagaattcacacaggagaaaaacccta tcaatgtaacgaatgtgactataggaccacccagtcatcacatcttaaatcacacatgctcacacacacaggggaaaaac ctttccagtgtaaggaatgcgacttctgtacaactaccccagccaaactaagagttcatcagagacaacacacaggagaa aagccatacaaatgtacacagtgcgacttcgcctctcctcaatccagcgctttgagagtacacatgaggaaacacactgg tgaaaaaccatatagatgtgatatgtgtgactacagtaccgtgaccagaaaccggctctttcaacatgcaaaaacacata aacaaattaaagaagaggcagaaaaaatcaaagaagaagtagaagacttagatatggatcagttgtaa |
|
Protein
| Protein ID | pfu_aug1.0_46935.1_41393.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_46935.1_41393.t1 VYGASLKVHLKIHNKDKEYNVKCDICDFRTFNYCNLRSHYRKHTGEKPFKCDLCDYRAAFKNNLRMHQLLHTGEKPFKCD MCDFTAAHTTTLTIHKRQHTGEKPYKCDECDFRTKQRSHLKTHKRIHTGEKPYQCNECDYRTTQSSHLKSHMLTHTGEKP FQCKECDFCTTTPAKLRVHQRQHTGEKPYKCTQCDFASPQSSALRVHMRKHTGEKPYRCDMCDYSTVTRNRLFQHAKTHK QIKEEAEKIKEEVEDLDMDQL |
|