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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4694.1_45010
Locus scaffold4694.1 : 24266 ... 27329 : +
To GenomeBrowser scaffold4694.1:24266..27329
Genes list of scaffold scaffold4694.1
Synonym pfu_aug2.0_4251.1_05967

Manual annotation
Study fieldBiomineralization
Gene nameKRMP-1
Descriptionreciprocal bLASTN best hit to NCBI Accession AB507411the CDS also exist in pfu_aug1.0_229418.1_28682.t1, pfu_aug1.0_265660.1_50281.t1, pfu_aug1.0_56250.1_05594.t1, pfu_aug1.0_5122.1_59706.t1.
mRNA evidence

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4694.1_45010.t1 gi|74054886|gb|AAZ95764.1| lysine-rich matrix protein-2 [Pinctada fucata] 0.0

Transcript
Transcript IDpfu_aug1.0_4694.1_45010.t1
Definition-
>pfu_aug1.0_4694.1_45010.t1
atgaagttcgccgctgttttggccgttttcctcctacttggagcattcggtgccgatggatactggcataaacctaatct
gaatatctgttggtggaagctgaagtggtgcctgaagaaatgtcatccctgggattggaaatgcaaaaagaaatgttatt
ggaaatataaatggtgcctacataaatttggtggacattatccgtatggtggttatggcgccggatccagtggtggatat
ggatatggtgacgacgattacacgtctgggggatacggatatggtcatcgtaaatacaaatactaa

Protein
Protein IDpfu_aug1.0_4694.1_45010.t1
Definition-
>pfu_aug1.0_4694.1_45010.t1
MKFAAVLAVFLLLGAFGADGYWHKPNLNICWWKLKWCLKKCHPWDWKCKKKCYWKYKWCLHKFGGHYPYGGYGAGSSGGY
GYGDDDYTSGGYGYGHRKYKY

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