Gene
| Gene Model ID | pfu_aug1.0_4695.1_67045 |
|---|---|
| Locus | scaffold4695.1 : 1 ... 12933 : + |
| To GenomeBrowser | scaffold4695.1:1..12933 |
| Genes list of scaffold | scaffold4695.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4695.1_67045.t1 | 2 | 1 | EF-hand_5 | 43 | 52 | 2.5e-08 | 32.9 | 0.00062 | 1.8 | 8.0 |
| pfu_aug1.0_4695.1_67045.t1 | 2 | 1 | EF-hand_1 | 43 | 57 | 2.3e-07 | 29.6 | 0.0012 | 3.6 | 7.1 |
| pfu_aug1.0_4695.1_67045.t1 | 2 | 1 | EF-hand_6 | 43 | 57 | 4.4e-07 | 29.2 | 0.00017 | 0.5 | 10.3 |
| pfu_aug1.0_4695.1_67045.t1 | 2 | 2 | EF-hand_5 | 78 | 97 | 2.5e-08 | 32.9 | 4.9e-09 | 1.5e-05 | 24.1 |
| pfu_aug1.0_4695.1_67045.t1 | 2 | 2 | EF-hand_1 | 78 | 97 | 2.3e-07 | 29.6 | 7.5e-08 | 0.00022 | 20.2 |
| pfu_aug1.0_4695.1_67045.t1 | 2 | 2 | EF-hand_6 | 78 | 97 | 4.4e-07 | 29.2 | 1.6e-06 | 0.0046 | 16.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4695.1_67045.t1 | gi|157168335|ref|NP_001096688.1| | NADPH oxidase 5 [Canis lupus familiaris] | 3.0e-17 |
Transcript
| Transcript ID | pfu_aug1.0_4695.1_67045.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4695.1_67045.t1 atcttttcatcacgacttcattagctatttcataagttacatgtacattcctacatctaataacatgttgcttttgcttc acttgtacaccccatctgggaaagttcgcagggataattctggctggtcagggagtattgacagagaggaactgaggatt gtacttcggtcttgtatggaggagtcctccctgagtctaggagatgatgaccttaatgcactgacagacattctctttga tgccgccgacgtagacgagagtgggactatcacatttgaagagctcgaagcagaactgaagaaacacccaggagtcatag agaacttaacgatcaggtag |
|
Protein
| Protein ID | pfu_aug1.0_4695.1_67045.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4695.1_67045.t1 SFHHDFISYFISYMYIPTSNNMLLLLHLYTPSGKVRRDNSGWSGSIDREELRIVLRSCMEESSLSLGDDDLNALTDILFD AADVDESGTITFEELEAELKKHPGVIENLTIR |
|