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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4695.1_67046
Locus scaffold4695.1 : 14396 ... 26263 : +
To GenomeBrowser scaffold4695.1:14396..26263
Genes list of scaffold scaffold4695.1
Synonym pfu_aug2.0_11.1_03391

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4695.1_67046.t1 1 1 Ferric_reduct 18 76 1.3e-06 28.5 5.3e-10 2.0e-06 27.9
pfu_aug1.0_4695.1_67046.t1 1 1 NAD_binding_6 143 289 4.8e-22 78.5 2.5e-25 9.4e-22 77.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4695.1_67046.t1 gi|348541713|ref|XP_003458331.1| 0.0

Transcript
Transcript IDpfu_aug1.0_4695.1_67046.t1
Definition-
>pfu_aug1.0_4695.1_67046.t1
atgctcaacttggtgctctatcctgcccgtatctgtggaatgaacttgaactttaactgcatgttcgtcctggtattgat
gttgaggaagtgtctgacgtacttgaggatggtcaaggttatagctctcatccttccactcgatcagaatatactgttcc
ataagatggtggggatcatgatagctgtctatagtgccatccataccctgacccatataggaaatgcaggagagaaattc
ttcagatctaagttgatgaaattagcccggtatggaaagacttacatagaggaagttaaccttttaccatctggaatggc
tctggcaatggagaagcgtattgctcagaaacataaagctgtaaagatcaggtgctatgtagatggtccttatggaacag
cgacgcgggagatttttgaaaccgaacacgcagtattagttggtgctggaataggcgtcaccccaatggcgtcaatatta
caaagcgtcatgtatcgatacaaagaatccaaaaggacttgtccacagtgcaaacatgaattttatggaaacattcctga
atccacaatgaaattgaaaaaggttgatttcatatggataaacagagatcaaaaaagttttgaatggtttgtaagtctac
tttcgaaattggaggcggaacaaatcgacgtcactcatgacccggaagtagaaccggccaaagtcattgacattcatttg
tacatgacggcagcacaatcaaaaacagatatgaaaggcatcggcctacaggtggcgcttgatttactgcaccaaaaaga
aaacaaggatctcatcacagggttgaagacaagaacgcaagccggacgtcctaactggaatgaggtacgtgtgtga

Protein
Protein IDpfu_aug1.0_4695.1_67046.t1
Definition-
>pfu_aug1.0_4695.1_67046.t1
MLNLVLYPARICGMNLNFNCMFVLVLMLRKCLTYLRMVKVIALILPLDQNILFHKMVGIMIAVYSAIHTLTHIGNAGEKF
FRSKLMKLARYGKTYIEEVNLLPSGMALAMEKRIAQKHKAVKIRCYVDGPYGTATREIFETEHAVLVGAGIGVTPMASIL
QSVMYRYKESKRTCPQCKHEFYGNIPESTMKLKKVDFIWINRDQKSFEWFVSLLSKLEAEQIDVTHDPEVEPAKVIDIHL
YMTAAQSKTDMKGIGLQVALDLLHQKENKDLITGLKTRTQAGRPNWNEVRV

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