Gene
| Gene Model ID | pfu_aug1.0_47.1_50579 |
|---|---|
| Locus | scaffold47.1 : 19344 ... 35175 : - |
| To GenomeBrowser | scaffold47.1:19344..35175 |
| Genes list of scaffold | scaffold47.1 |
| Synonym | pfu_aug2.0_711.1_04509 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_47.1_50579.t1 | 2 | 1 | EF-hand_4 | 2 | 54 | 7.3e-24 | 83.5 | 8.6e-15 | 3.8e-12 | 45.8 |
| pfu_aug1.0_47.1_50579.t1 | 1 | 1 | EF-hand_7 | 4 | 120 | 8.9e-06 | 25.7 | 2.3e-07 | 0.0001 | 22.3 |
| pfu_aug1.0_47.1_50579.t1 | 3 | 1 | EF-hand_1 | 6 | 29 | 3.0e-09 | 35.5 | 2.9e-07 | 0.00013 | 21.0 |
| pfu_aug1.0_47.1_50579.t1 | 3 | 2 | EF-hand_1 | 101 | 122 | 3.0e-09 | 35.5 | 0.0016 | 0.73 | 9.2 |
| pfu_aug1.0_47.1_50579.t1 | 2 | 2 | EF-hand_4 | 109 | 180 | 7.3e-24 | 83.5 | 8.3e-11 | 3.7e-08 | 33.0 |
| pfu_aug1.0_47.1_50579.t1 | 3 | 3 | EF-hand_1 | 135 | 157 | 3.0e-09 | 35.5 | 0.62 | 280.0 | 1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_47.1_50579.t1 | gi|291240549|ref|XP_002740181.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_47.1_50579.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_47.1_50579.t1 atggatgtgttaggtcagatttgggagcttagtgacgtagacaaagatggctacctggacagagaagaattcactgtggc aatgcatctggtatacaaagccttagagaaggagcctgtacctaaagcattacccctggagctgataccaccttctaagc gacgtgcgggagggccgcctgtaggtggagttcctgtcttaccaggactggcgaatagaccctccccagtacagagatct ggatcaccagctgttggagtaccatgggtaatcacttctacagataaggctagctacgatgttcttttcaagaaatctga cctagatctggacggctttgtgtctggagaagagatacgtggggttttcttacagagtgcattaccaaacaatgtcctgg cacatatatggaacctatgtgacataaaggcaatagggaagttgaactctgagcagtttgctttggccatgtatctaatc cagcagaaactgaaaggagtagatcccccgtccacactaacaccagaaatgatccctccctccatgagggccaagtcagc cactgataccgcttcatttggtgtagctgaaggagtgaatgcaggaccatacagtcatgttgctgacccttcagccataa aagaactggacgtaatcagtaaggaaatagagaatatgaagagagagaagatgcagatagagatggacaacaatcagaag gaggctgatataaaaataatcaacggagaggttcagacgttacagaaggaattagacgctatcaccgctacgttacaaca gctggaaaaccagaaaaaggaggctcagaaacgactggacgaacttgatgaaaagaagtccaatttagaaagtaatgttc gagaattgaaagagaaagtagagaatgaaatgaagcaaatcaatgatttgagatctcagctgaatgaccaagaaaaatct gttcagaaccaagaaaaagagctggagaagttacgagttgagctgagtagtttgaaggatgaggagggtcgactggagac caacgtagagagtggtaaacaacagctggaggctctcgttaaatcacagaaagacctacaagttcaagtcaaccagacca gaacaagagttcagcatttagatgaccaacagagaggtgtaaaactcagtgtagctagttataactccagcctcaatgga gaggtgtcaagtatcttctctagtgctaacaatgaggacacactaagtactcatgccacagtaagtgtgatcaagtttag tgttactatccacagctctagtgctaacaaagaggacacactaagtactcatgctacaaagccagggtcactatttgata gtgatccctttgctcctcagtccccagccaaatcttcctcccctgctccatcattacctcccaaatccaagaagcagcct ccccccaggccagccccacccaagtcccgaccaacaccaagtcctagtcaacaacccgataaaggattcggagcattcga ctctgatccatttggaggtagcgatccttttgctagttcaggaggggccagtagtaatacaggaacagctgatccatttg ccaactttgctgattttagtccaagcaagtttgatataaatgtggatgattcagcatgggggcagaaaaataccaaagca gcatcgccttggctttcggacttaggaaccactgacgacagtgaagcatga |
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Protein
| Protein ID | pfu_aug1.0_47.1_50579.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_47.1_50579.t1 MDVLGQIWELSDVDKDGYLDREEFTVAMHLVYKALEKEPVPKALPLELIPPSKRRAGGPPVGGVPVLPGLANRPSPVQRS GSPAVGVPWVITSTDKASYDVLFKKSDLDLDGFVSGEEIRGVFLQSALPNNVLAHIWNLCDIKAIGKLNSEQFALAMYLI QQKLKGVDPPSTLTPEMIPPSMRAKSATDTASFGVAEGVNAGPYSHVADPSAIKELDVISKEIENMKREKMQIEMDNNQK EADIKIINGEVQTLQKELDAITATLQQLENQKKEAQKRLDELDEKKSNLESNVRELKEKVENEMKQINDLRSQLNDQEKS VQNQEKELEKLRVELSSLKDEEGRLETNVESGKQQLEALVKSQKDLQVQVNQTRTRVQHLDDQQRGVKLSVASYNSSLNG EVSSIFSSANNEDTLSTHATVSVIKFSVTIHSSSANKEDTLSTHATKPGSLFDSDPFAPQSPAKSSSPAPSLPPKSKKQP PPRPAPPKSRPTPSPSQQPDKGFGAFDSDPFGGSDPFASSGGASSNTGTADPFANFADFSPSKFDINVDDSAWGQKNTKA ASPWLSDLGTTDDSEA |
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