Gene
| Gene Model ID | pfu_aug1.0_47.1_50582 |
|---|---|
| Locus | scaffold47.1 : 62616 ... 68231 : + |
| To GenomeBrowser | scaffold47.1:62616..68231 |
| Genes list of scaffold | scaffold47.1 |
| Synonym | pfu_aug2.0_996.1_21332 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_47.1_50582.t1 | 15 | 1 | zf-C2H2_4 | 8 | 30 | 2.6e-27 | 93.1 | 0.00018 | 0.43 | 11.0 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 1 | zf-C2H2 | 8 | 30 | 1.1e-20 | 72.6 | 0.0097 | 24.0 | 5.5 |
| pfu_aug1.0_47.1_50582.t1 | 12 | 1 | zf-C2H2_6 | 8 | 17 | 2.4e-12 | 46.2 | 0.27 | 660.0 | 0.4 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 2 | zf-C2H2_4 | 37 | 59 | 2.6e-27 | 93.1 | 0.031 | 77.0 | 3.9 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 2 | zf-C2H2 | 37 | 59 | 1.1e-20 | 72.6 | 0.085 | 210.0 | 2.5 |
| pfu_aug1.0_47.1_50582.t1 | 12 | 2 | zf-C2H2_6 | 37 | 47 | 2.4e-12 | 46.2 | 0.32 | 800.0 | 0.1 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 3 | zf-C2H2_4 | 79 | 100 | 2.6e-27 | 93.1 | 4.2e-07 | 0.001 | 19.2 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 3 | zf-C2H2 | 79 | 100 | 1.1e-20 | 72.6 | 4.9e-05 | 0.12 | 12.7 |
| pfu_aug1.0_47.1_50582.t1 | 12 | 3 | zf-C2H2_6 | 79 | 102 | 2.4e-12 | 46.2 | 3.1e-06 | 0.0078 | 16.0 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 4 | zf-C2H2_4 | 108 | 129 | 2.6e-27 | 93.1 | 0.00024 | 0.59 | 10.5 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 4 | zf-C2H2 | 108 | 129 | 1.1e-20 | 72.6 | 0.00031 | 0.76 | 10.2 |
| pfu_aug1.0_47.1_50582.t1 | 12 | 4 | zf-C2H2_6 | 108 | 127 | 2.4e-12 | 46.2 | 0.00074 | 1.8 | 8.5 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 5 | zf-C2H2 | 136 | 157 | 1.1e-20 | 72.6 | 0.0072 | 18.0 | 5.9 |
| pfu_aug1.0_47.1_50582.t1 | 12 | 5 | zf-C2H2_6 | 136 | 153 | 2.4e-12 | 46.2 | 0.14 | 350.0 | 1.3 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 5 | zf-C2H2_4 | 137 | 157 | 2.6e-27 | 93.1 | 0.0038 | 9.3 | 6.8 |
| pfu_aug1.0_47.1_50582.t1 | 12 | 6 | zf-C2H2_6 | 161 | 182 | 2.4e-12 | 46.2 | 7.0e-05 | 0.17 | 11.8 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 6 | zf-C2H2_4 | 162 | 183 | 2.6e-27 | 93.1 | 0.00034 | 0.84 | 10.1 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 6 | zf-C2H2 | 162 | 182 | 1.1e-20 | 72.6 | 0.0013 | 3.1 | 8.3 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 7 | zf-C2H2_4 | 350 | 371 | 2.6e-27 | 93.1 | 0.0001 | 0.26 | 11.7 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 7 | zf-C2H2 | 350 | 371 | 1.1e-20 | 72.6 | 9.2e-05 | 0.23 | 11.8 |
| pfu_aug1.0_47.1_50582.t1 | 12 | 7 | zf-C2H2_6 | 351 | 373 | 2.4e-12 | 46.2 | 0.0001 | 0.25 | 11.3 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 8 | zf-C2H2_4 | 377 | 400 | 2.6e-27 | 93.1 | 0.0015 | 3.8 | 8.0 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 8 | zf-C2H2 | 377 | 400 | 1.1e-20 | 72.6 | 1.4e-06 | 0.0033 | 17.6 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 9 | zf-C2H2 | 631 | 652 | 1.1e-20 | 72.6 | 0.003 | 7.4 | 7.1 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 9 | zf-C2H2_4 | 632 | 652 | 2.6e-27 | 93.1 | 0.00085 | 2.1 | 8.8 |
| pfu_aug1.0_47.1_50582.t1 | 12 | 8 | zf-C2H2_6 | 632 | 652 | 2.4e-12 | 46.2 | 4.2e-06 | 0.01 | 15.6 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 10 | zf-C2H2_4 | 658 | 679 | 2.6e-27 | 93.1 | 1.6e-06 | 0.004 | 17.3 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 10 | zf-C2H2 | 658 | 678 | 1.1e-20 | 72.6 | 0.00016 | 0.39 | 11.1 |
| pfu_aug1.0_47.1_50582.t1 | 12 | 9 | zf-C2H2_6 | 658 | 672 | 2.4e-12 | 46.2 | 0.006 | 15.0 | 5.6 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 11 | zf-C2H2 | 686 | 708 | 1.1e-20 | 72.6 | 7.8e-05 | 0.19 | 12.1 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 11 | zf-C2H2_4 | 688 | 708 | 2.6e-27 | 93.1 | 9.0e-05 | 0.22 | 11.9 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 12 | zf-C2H2_4 | 715 | 740 | 2.6e-27 | 93.1 | 6.1e-05 | 0.15 | 12.4 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 12 | zf-C2H2 | 715 | 740 | 1.1e-20 | 72.6 | 6.4e-05 | 0.16 | 12.3 |
| pfu_aug1.0_47.1_50582.t1 | 12 | 10 | zf-C2H2_6 | 753 | 764 | 2.4e-12 | 46.2 | 0.0011 | 2.8 | 7.9 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 13 | zf-C2H2_4 | 754 | 776 | 2.6e-27 | 93.1 | 0.00027 | 0.67 | 10.4 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 13 | zf-C2H2 | 754 | 776 | 1.1e-20 | 72.6 | 8.4e-07 | 0.0021 | 18.3 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 14 | zf-C2H2 | 784 | 807 | 1.1e-20 | 72.6 | 0.06 | 150.0 | 3.0 |
| pfu_aug1.0_47.1_50582.t1 | 12 | 11 | zf-C2H2_6 | 784 | 794 | 2.4e-12 | 46.2 | 0.042 | 100.0 | 2.9 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 14 | zf-C2H2_4 | 785 | 807 | 2.6e-27 | 93.1 | 0.0013 | 3.2 | 8.2 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 15 | zf-C2H2 | 821 | 843 | 1.1e-20 | 72.6 | 6.8e-05 | 0.17 | 12.3 |
| pfu_aug1.0_47.1_50582.t1 | 15 | 15 | zf-C2H2_4 | 822 | 843 | 2.6e-27 | 93.1 | 4.2e-05 | 0.1 | 12.9 |
| pfu_aug1.0_47.1_50582.t1 | 12 | 12 | zf-C2H2_6 | 822 | 831 | 2.4e-12 | 46.2 | 0.0058 | 14.0 | 5.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_47.1_50582.t1 | gi|348515103|ref|XP_003445079.1| | PREDICTED: zinc finger protein 629-like isoform X1 [Oreochromis niloticus] | 2.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_47.1_50582.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_47.1_50582.t1 atggagcactcccaacgctggtacaaatgtaaatactgtagcagacttttcttccgacaggttgactgtgataggcatgc tgtagtccatgctaaaaggaagcaggagaaatgtaagttctgtgatgtcagatatgtttcagtggtaggaaggaaccgac atatgaagaaccgacatccagaagaatggaagaaaatctgtcaggaaaccgaaaacctggagaagaaaggaatcaagtgt caggtgtgtaacgcaactttcccgtctatcaataagatgaaacgacacatgaggtatcataagaagagactcatcaacac caggtgttatgtctgtaatgaggaatttcagactactgagcagttgatggagcatgttaaagtacaccctgcatctgtgt tggtaacctgtgaaatgtgcaatgaaaagtttgacagtcatctcaagttacaccagcatcagtctgtatgtccaaaagca gtctattcctgtaatgaatgctgtcaagtctttggttcattagacgagcttgaaagacataaaattgaggaagggcatga ggaggaagatgaggaagaggaaggtgaggagggagtgatggaggaggagtctgaggacacaggatcactgcactctctta aaatcagcagtgttgtgagctgtgcttctgactcggcctttacggagagtgaagacgcacagacagttcctcctgataat tatggtgagacaagtaaggacaatagcagtggcatggcaagttttgtatgtggagaggcaccagggagtggtgtagaggc acctggattcattacaggcattaagacggagcctgaagattatgtagatgatagcctgttaatgactgatattaaaacag agccaggagaaagcagcatgacggagcaagacagtagcatgacaggaatggacactactcaagacagcagctttagtatg aatgagactgaccagtcaatggaatatgccgatgacattgaccttgtatccccataccagcagaagaaaaagtcttcatt gaccagtgtatgctacttttgtggacaagtttttgtcaacagaaaaactttctcgactcatctgaaaagtcatatgcaaa atggaaaatttaagtgtctttactgtgattattcatacactaagcctgataatgtacacaggcacatgaaatgggtacat ggaaaagtgaaagaagctaaaaaatcagaaaagagacctattttgccaaagccaaagggggtcaatgatgtttattttct cccagttgactctggtgtgactgtgccatctacgattggcaatgtttggagtttaacaggaattacgtcgaatgctgcac ctccaaatggcaataatgtaagcaaaaaatccatgaagctcaaagcatcagaatatttgccaaaaccttgggctaagagt cagatcaattttcatccaacacagacattagcatttccatgcactcctgaacagattgtgagcagtgattcctctggtgg tgttctaagctctggtagtactgctggtaataacatttcatactcaacagtttcatttgtaccagaggcacctcttataa gtgccacaagctcaacagctccgtttgtaccagaggtacgtcttgtaaatgctgctgagacaccccttgtaaatgctgct agcaaatcagtccaatatcaaactgtatcatttgtacctatttcagctccacctagcactgctttgtcatctagtgcgac tgaatcaacatcatctacggcatcaaacaaaaagccctctacatcagtcagtgctgcttcatcatccactaccacatctg tttccaaaccagatccatccgtatccaaatctgctcctgccactctttgtcactgtctgacatgtaacgccgactttacc agctttgacaaactccaggagcacatgaaggaacatgaagataagcaggaatacccatgtcatttttgccaaaaaccttt cccctcgttagaggcatgtcaaaagcatatgctctcagctaaggaagtttgccgctttggttgtgaatactgcggagatg taatgccaacaagatttcacctctggaatcataggaaaattcatgctaaggatggcagaaattattcttgttatgtagat ggttgtacaaagagattcacatcacacagggtactcaaaaaacacattgtttcattgcacgttaccaatgcaaatgtgga ttattttgattttagtacgtttcgttgtaaagaatgtggaaaattgttctcgctcaagtcagatcttgacttccatgctc ggtctcacaaggaaaaaccgccattagttgagtgtaagacttgtggaaaattgatcagcagtgcagacaagcgatgtttg aagcgacatgaactgcgtcatcttaaacctggggaaatatttaaatgcgacagagaactctcatgtcatttatgtaaaca aacatttaattctgcattagggcttgatcaacatcttcgaactgtgcatatagggaatttagtgggggcagactcgaaga aagatgtagttgttatcgattcagactcctctattgatgactatggggaggaagataaagatgacgatgaaattgataag cttacaggaattattccccttgatccaaaagtaatgttacactga |
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Protein
| Protein ID | pfu_aug1.0_47.1_50582.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_47.1_50582.t1 MEHSQRWYKCKYCSRLFFRQVDCDRHAVVHAKRKQEKCKFCDVRYVSVVGRNRHMKNRHPEEWKKICQETENLEKKGIKC QVCNATFPSINKMKRHMRYHKKRLINTRCYVCNEEFQTTEQLMEHVKVHPASVLVTCEMCNEKFDSHLKLHQHQSVCPKA VYSCNECCQVFGSLDELERHKIEEGHEEEDEEEEGEEGVMEEESEDTGSLHSLKISSVVSCASDSAFTESEDAQTVPPDN YGETSKDNSSGMASFVCGEAPGSGVEAPGFITGIKTEPEDYVDDSLLMTDIKTEPGESSMTEQDSSMTGMDTTQDSSFSM NETDQSMEYADDIDLVSPYQQKKKSSLTSVCYFCGQVFVNRKTFSTHLKSHMQNGKFKCLYCDYSYTKPDNVHRHMKWVH GKVKEAKKSEKRPILPKPKGVNDVYFLPVDSGVTVPSTIGNVWSLTGITSNAAPPNGNNVSKKSMKLKASEYLPKPWAKS QINFHPTQTLAFPCTPEQIVSSDSSGGVLSSGSTAGNNISYSTVSFVPEAPLISATSSTAPFVPEVRLVNAAETPLVNAA SKSVQYQTVSFVPISAPPSTALSSSATESTSSTASNKKPSTSVSAASSSTTTSVSKPDPSVSKSAPATLCHCLTCNADFT SFDKLQEHMKEHEDKQEYPCHFCQKPFPSLEACQKHMLSAKEVCRFGCEYCGDVMPTRFHLWNHRKIHAKDGRNYSCYVD GCTKRFTSHRVLKKHIVSLHVTNANVDYFDFSTFRCKECGKLFSLKSDLDFHARSHKEKPPLVECKTCGKLISSADKRCL KRHELRHLKPGEIFKCDRELSCHLCKQTFNSALGLDQHLRTVHIGNLVGADSKKDVVVIDSDSSIDDYGEEDKDDDEIDK LTGIIPLDPKVMLH |
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