Gene
| Gene Model ID | pfu_aug1.0_4703.1_52340 |
|---|---|
| Locus | scaffold4703.1 : 1 ... 12255 : - |
| To GenomeBrowser | scaffold4703.1:1..12255 |
| Genes list of scaffold | scaffold4703.1 |
| Synonym | pfu_aug2.0_2170.1_02022 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4703.1_52340.t1 | 2 | 1 | PLAT | 8 | 116 | 1.1e-18 | 67.6 | 1.5e-22 | 1.1e-18 | 67.6 |
| pfu_aug1.0_4703.1_52340.t1 | 2 | 2 | PLAT | 143 | 180 | 1.1e-18 | 67.6 | 0.34 | 2500.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4703.1_52340.t1 | gi|72139667|ref|XP_789433.1| | 8.0e-31 |
Transcript
| Transcript ID | pfu_aug1.0_4703.1_52340.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4703.1_52340.t1 atgctcgccagcagcgaagtttacaaaattaccgtcaagacgggtgacagaaagcgcgccggaactgacgccaacgttac gatcgttcttcgagactgcaaaggaaatagcaccaaggaagctaagctggataatttcctcagagacgatttcgaaagag gtagaactgataaattcacggtcaaagacaaaacgaagttagacgaggttcactttatagagctttgcagggacgatgca ggattgttcagtgattggtacgtggatcatgttacggtaacaatcaaaagtagtgaccaggattttgtgtttcctattta tagatggatccgaccaaatttcaagtacagaattgttcacctggatacgttcctgccacaagaggatccccatcaggagc agagacagatagaattagaggagaaaaagaacgtgtatgagtatgaacagaaaataaccgacggcccctctcagcaaatt attctctataaatatatcgtcagcaagtcacaagcgcattccaaacgtttgaatattagaacatttccgtggggagcaaa atttgaattttcgaaaatcttaagcgccaaagaattttttaattttcgatttgcaagctttcgtgtttaa |
|
Protein
| Protein ID | pfu_aug1.0_4703.1_52340.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4703.1_52340.t1 MLASSEVYKITVKTGDRKRAGTDANVTIVLRDCKGNSTKEAKLDNFLRDDFERGRTDKFTVKDKTKLDEVHFIELCRDDA GLFSDWYVDHVTVTIKSSDQDFVFPIYRWIRPNFKYRIVHLDTFLPQEDPHQEQRQIELEEKKNVYEYEQKITDGPSQQI ILYKYIVSKSQAHSKRLNIRTFPWGAKFEFSKILSAKEFFNFRFASFRV |
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