Gene
| Gene Model ID | pfu_aug1.0_4712.1_37948 |
|---|---|
| Locus | scaffold4712.1 : 15246 ... 17255 : + |
| To GenomeBrowser | scaffold4712.1:15246..17255 |
| Genes list of scaffold | scaffold4712.1 |
| Synonym | pfu_aug2.0_2086.1_21924 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4712.1_37948.t1 | 5 | 1 | Ank_5 | 6 | 31 | 4.1e-24 | 84.0 | 0.0017 | 4.1 | 7.7 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 1 | Ank_4 | 6 | 32 | 5.0e-19 | 68.2 | 0.0016 | 4.0 | 8.0 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 1 | Ank_3 | 6 | 31 | 2.8e-18 | 64.2 | 0.00023 | 0.56 | 10.6 |
| pfu_aug1.0_4712.1_37948.t1 | 3 | 1 | Ank_2 | 7 | 100 | 4.8e-31 | 106.9 | 3.7e-22 | 9.1e-19 | 67.6 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 1 | Ank | 7 | 30 | 6.6e-26 | 88.7 | 5.1e-05 | 0.13 | 12.1 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 2 | Ank_5 | 39 | 81 | 4.1e-24 | 84.0 | 2.2e-09 | 5.5e-06 | 26.4 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 2 | Ank_4 | 42 | 85 | 5.0e-19 | 68.2 | 7.6e-12 | 1.9e-08 | 34.6 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 2 | Ank_3 | 42 | 67 | 2.8e-18 | 64.2 | 6.4e-07 | 0.0016 | 18.5 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 2 | Ank | 43 | 72 | 6.6e-26 | 88.7 | 1.8e-10 | 4.4e-07 | 29.3 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 3 | Ank_5 | 60 | 94 | 4.1e-24 | 84.0 | 2.7e-06 | 0.0067 | 16.6 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 3 | Ank_3 | 74 | 99 | 2.8e-18 | 64.2 | 0.012 | 29.0 | 5.3 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 3 | Ank | 75 | 100 | 6.6e-26 | 88.7 | 0.00032 | 0.8 | 9.6 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 3 | Ank_4 | 79 | 117 | 5.0e-19 | 68.2 | 4.7e-05 | 0.12 | 12.9 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 4 | Ank_5 | 93 | 145 | 4.1e-24 | 84.0 | 8.3e-14 | 2.1e-10 | 40.5 |
| pfu_aug1.0_4712.1_37948.t1 | 3 | 2 | Ank_2 | 108 | 151 | 4.8e-31 | 106.9 | 1.1e-12 | 2.7e-09 | 37.2 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 4 | Ank | 110 | 137 | 6.6e-26 | 88.7 | 6.8e-11 | 1.7e-07 | 30.7 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 4 | Ank_4 | 110 | 146 | 5.0e-19 | 68.2 | 8.6e-08 | 0.00021 | 21.6 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 4 | Ank_3 | 110 | 135 | 2.8e-18 | 64.2 | 3.9e-08 | 9.7e-05 | 22.2 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 5 | Ank | 140 | 147 | 6.6e-26 | 88.7 | 0.08 | 200.0 | 2.0 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 5 | Ank_3 | 140 | 148 | 2.8e-18 | 64.2 | 0.31 | 770.0 | 0.8 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 5 | Ank_4 | 168 | 186 | 5.0e-19 | 68.2 | 0.83 | 2000.0 | -0.6 |
| pfu_aug1.0_4712.1_37948.t1 | 3 | 3 | Ank_2 | 169 | 185 | 4.8e-31 | 106.9 | 1.0 | 2500.0 | -1.1 |
| pfu_aug1.0_4712.1_37948.t1 | 5 | 5 | Ank_5 | 170 | 186 | 4.1e-24 | 84.0 | 0.015 | 38.0 | 4.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4712.1_37948.t1 | gi|123398905|ref|XP_001301368.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 2.0e-15 |
Transcript
| Transcript ID | pfu_aug1.0_4712.1_37948.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4712.1_37948.t1 atggacattcctgctttgctctaccatgcagtggagagagacgacgttcaaaaagttcgacaactcttggatttaggcgc cgatccaaatgaaacatacgaggactttgtaaacatcagcagtcgctcaatcctgcacgtctgttgtaggagggggagtg tagaatgtgccaaactactggtcagccatggtgctgatgcactggctagagataagtacaagatgacgcccctggtatac gctataatatcacaatataataaggtggccgaaatccttgtacaggcttgtccagaggttgttcatgccactgaccgcag cagtaaaacaccccttcacttcgccgtggagtcagactgtgtagattccgtcagggtattactacgtcatggtgctgatg tcaaccagcgtcgattgcacggcttgacgccgctaatgacgcttgtgaccacaccctccttaaagaacagagcattcatt ggtcagttgttaactgaccccgacagtgatgtagatattgacctcaaagattcccatcatcagtggactgccctccaggt atga |
|
Protein
| Protein ID | pfu_aug1.0_4712.1_37948.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4712.1_37948.t1 MDIPALLYHAVERDDVQKVRQLLDLGADPNETYEDFVNISSRSILHVCCRRGSVECAKLLVSHGADALARDKYKMTPLVY AIISQYNKVAEILVQACPEVVHATDRSSKTPLHFAVESDCVDSVRVLLRHGADVNQRRLHGLTPLMTLVTTPSLKNRAFI GQLLTDPDSDVDIDLKDSHHQWTALQV |
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