Gene
| Gene Model ID | pfu_aug1.0_4712.1_37950 |
|---|---|
| Locus | scaffold4712.1 : 25684 ... 37625 : - |
| To GenomeBrowser | scaffold4712.1:25684..37625 |
| Genes list of scaffold | scaffold4712.1 |
| Synonym | pfu_aug2.0_2086.1_21926 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Pifuc-5-HT4-like |
| Description | Reciprocal BLASTP best hit to NCBI Accession AEA76357.1, 5-HT4 receptor (Aplysia californica) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4712.1_37950.t1 | 1 | 1 | 7TM_GPCR_Srsx | 69 | 348 | 2.6e-10 | 39.9 | 1.3e-13 | 5.0e-10 | 38.9 |
| pfu_aug1.0_4712.1_37950.t1 | 1 | 1 | 7tm_1 | 73 | 334 | 0.0 | 230.4 | 0.0 | 0.0 | 230.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4712.1_37950.t1 | gi|327420566|gb|AEA76357.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4712.1_37950.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4712.1_37950.t1 atgaaaccaactgacataaagttgtattcgaatgacagctatgtcttcccagggatgtacaactttacaactaacacgtc tacagaccagctgacgtcaggattgaattgtgacgtcattttagcggataaagctccgcctccacctgtttattccaagg aggtcagtacgttcataggagctgtactttcggtgttccctttagtgacactgtccggaaattccctagttatcatagct gtttttacgcataaacggctaaggacgattaccaatgccttcgtcgtgtcgctgtccgtcgccgacttcttagtggctct tttagtgatgccgttcgctgtatatcaacaattcaacgacaaaaaatggggtttaggtcactatatgtgtaagatagtca cgtgtctagatataatgaccaccacgtcgtccataatgcacctgtcctgtttggccgtggacaggtacctggctatatgc cggccatttgtacacgagagactcacaaataggattgtatgtgctatgttaacatcatgttggatattacccatgttcat ttcgtttcttccaatattaaatgaatggaatttaataggaatagaggatgtgcatacgtgtatgttcggtgaatacgaca cacactgtggtctgatagtgaacattcccttcgcgcttatatgttctaccatcgcattttacattcccgccatttttatg atcatctgtaatatcaaaatatacctcgcagcaagaaagcaagcacaccatatcagaacattagaagcatcattacataa acataacaaaaggaaattaaagcaggagactaaggccgctaaaactattggtataattatgggttgtttctgtgtctgct ggtttccgtttttcatagtaaacgttatagacccgctgataggccataaaataacgtatgtcccgtggacaatagctcta tggttaggatatctcaattccatgctaaatccatttctctactataatttcaatcgatcatttaaaacggctttcaatcg tttattgacttgtaaggtgtgtcagggagtgcgtgagttcgaggagacggatccgcccagcaccaccagctaccataacg gcacgggacaccactgtaacgccttgttacccacagaaatgtccactttaaccctgtgccattaa |
|
Protein
| Protein ID | pfu_aug1.0_4712.1_37950.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4712.1_37950.t1 MKPTDIKLYSNDSYVFPGMYNFTTNTSTDQLTSGLNCDVILADKAPPPPVYSKEVSTFIGAVLSVFPLVTLSGNSLVIIA VFTHKRLRTITNAFVVSLSVADFLVALLVMPFAVYQQFNDKKWGLGHYMCKIVTCLDIMTTTSSIMHLSCLAVDRYLAIC RPFVHERLTNRIVCAMLTSCWILPMFISFLPILNEWNLIGIEDVHTCMFGEYDTHCGLIVNIPFALICSTIAFYIPAIFM IICNIKIYLAARKQAHHIRTLEASLHKHNKRKLKQETKAAKTIGIIMGCFCVCWFPFFIVNVIDPLIGHKITYVPWTIAL WLGYLNSMLNPFLYYNFNRSFKTAFNRLLTCKVCQGVREFEETDPPSTTSYHNGTGHHCNALLPTEMSTLTLCH |
|