Gene
Gene Model ID | pfu_aug1.0_4728.1_52352 |
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Locus | scaffold4728.1 : 16931 ... 29087 : - |
To GenomeBrowser | scaffold4728.1:16931..29087 |
Genes list of scaffold | scaffold4728.1 |
Synonym | NA |
Manual annotation
Study field | Biomineralization |
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Gene name | Chitin synthase like protein |
Description | Chitin synthase like protein, hit to BLAST (NCBI, XP_003150036.1) |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4728.1_52352.t1 | 1 | 1 | Chitin_synth_2 | 41 | 167 | 9.1e-13 | 47.4 | 2.2e-16 | 1.1e-12 | 47.1 |
pfu_aug1.0_4728.1_52352.t1 | 1 | 1 | Glyco_tranf_2_3 | 46 | 91 | 7.0e-06 | 26.0 | 2.0e-09 | 1.0e-05 | 25.4 |
pfu_aug1.0_4728.1_52352.t1 | 1 | 1 | Glyco_trans_2_3 | 48 | 156 | 6.9e-08 | 32.4 | 2.1e-11 | 1.0e-07 | 31.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4728.1_52352.t1 | gi|20178263|gb|AAG40111.1| | chitin synthase [Meloidogyne artiellia] | 2.0e-37 |
Transcript
Transcript ID | pfu_aug1.0_4728.1_52352.t1 |
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Definition | - |
>pfu_aug1.0_4728.1_52352.t1 cacacattctttttgatgacgcctttactgatgacgagaatggcaaacgtgtcttaaataaatatgcaacagatctttat aaagccatcgaccattcaatgaggcttggaattgcaacaaataagaaagaatacggattagaaggtgaagaccgatggtt ttgtactcttctgctgaagcagggatacagagttgaatactgtgctgcatcagacgctaagacctttgcaccagaaggat tcacggaattcttcaaacagcgcagaagatggagcccttcaacaattgctaatatcatagatatccttgcaagcttcgga tatatcgccgggaaaaatgatagcatatccaagctatatctagtttaccaagcttttctcctatgtacggcaataattac ccctgcatcgatccttctacttatgataggagccatcaatatagcgtttgacattcctccatggggagccatgatcattg ttctgttacctacagtcatatttaccatatccatctatgctgccacagaggatacacagataactcatctagaaaatatt gcaattgcttcgcagtcccctacttatttacatatcttacattgtaaaagatataaagaagatcctgacgaaaatctcaa cagcactcacagtagagcaccaagtggagcatcgacggacctctag |
Protein
Protein ID | pfu_aug1.0_4728.1_52352.t1 |
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Definition | - |
>pfu_aug1.0_4728.1_52352.t1 HILFDDAFTDDENGKRVLNKYATDLYKAIDHSMRLGIATNKKEYGLEGEDRWFCTLLLKQGYRVEYCAASDAKTFAPEGF TEFFKQRRRWSPSTIANIIDILASFGYIAGKNDSISKLYLVYQAFLLCTAIITPASILLLMIGAINIAFDIPPWGAMIIV LLPTVIFTISIYAATEDTQITHLENIAIASQSPTYLHILHCKRYKEDPDENLNSTHSRAPSGASTDL |