Gene
| Gene Model ID | pfu_aug1.0_473.1_15076 |
|---|---|
| Locus | scaffold473.1 : 8965 ... 22555 : - |
| To GenomeBrowser | scaffold473.1:8965..22555 |
| Genes list of scaffold | scaffold473.1 |
| Synonym | pfu_aug2.0_14.1_13397 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_473.1_15076.t1 | 8 | 1 | zf-H2C2_2 | 477 | 489 | 3.8e-06 | 26.9 | 0.046 | 98.0 | 3.5 |
| pfu_aug1.0_473.1_15076.t1 | 6 | 1 | zf-C2H2_jaz | 478 | 499 | 1.6e-06 | 28.1 | 1.6e-05 | 0.033 | 14.3 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 1 | zf-C2H2 | 479 | 502 | 7.5e-25 | 85.7 | 1.0e-07 | 0.00022 | 21.3 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 1 | zf-C2H2_4 | 479 | 502 | 4.6e-17 | 61.0 | 5.1e-06 | 0.011 | 16.0 |
| pfu_aug1.0_473.1_15076.t1 | 5 | 1 | zf-met | 480 | 497 | 4.1e-07 | 29.9 | 0.002 | 4.3 | 7.6 |
| pfu_aug1.0_473.1_15076.t1 | 8 | 2 | zf-H2C2_2 | 494 | 520 | 3.8e-06 | 26.9 | 0.0014 | 3.0 | 8.3 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 2 | zf-C2H2 | 511 | 530 | 7.5e-25 | 85.7 | 2.8e-07 | 0.00059 | 20.0 |
| pfu_aug1.0_473.1_15076.t1 | 6 | 2 | zf-C2H2_jaz | 511 | 530 | 1.6e-06 | 28.1 | 0.0066 | 14.0 | 5.9 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 2 | zf-C2H2_4 | 512 | 530 | 4.6e-17 | 61.0 | 5.8e-05 | 0.12 | 12.7 |
| pfu_aug1.0_473.1_15076.t1 | 5 | 2 | zf-met | 512 | 530 | 4.1e-07 | 29.9 | 0.0081 | 17.0 | 5.7 |
| pfu_aug1.0_473.1_15076.t1 | 8 | 3 | zf-H2C2_2 | 524 | 549 | 3.8e-06 | 26.9 | 0.00013 | 0.27 | 11.5 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 3 | zf-C2H2 | 539 | 561 | 7.5e-25 | 85.7 | 7.2e-05 | 0.15 | 12.4 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 3 | zf-C2H2_4 | 539 | 558 | 4.6e-17 | 61.0 | 3.7e-05 | 0.078 | 13.3 |
| pfu_aug1.0_473.1_15076.t1 | 6 | 3 | zf-C2H2_jaz | 540 | 556 | 1.6e-06 | 28.1 | 0.00051 | 1.1 | 9.5 |
| pfu_aug1.0_473.1_15076.t1 | 8 | 4 | zf-H2C2_2 | 553 | 575 | 3.8e-06 | 26.9 | 6.4e-05 | 0.13 | 12.5 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 4 | zf-C2H2 | 565 | 587 | 7.5e-25 | 85.7 | 4.7e-06 | 0.0099 | 16.1 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 4 | zf-C2H2_4 | 565 | 587 | 4.6e-17 | 61.0 | 1.7e-06 | 0.0036 | 17.5 |
| pfu_aug1.0_473.1_15076.t1 | 5 | 3 | zf-met | 565 | 585 | 4.1e-07 | 29.9 | 5.6e-07 | 0.0012 | 18.9 |
| pfu_aug1.0_473.1_15076.t1 | 6 | 4 | zf-C2H2_jaz | 565 | 584 | 1.6e-06 | 28.1 | 2.1e-06 | 0.0044 | 17.1 |
| pfu_aug1.0_473.1_15076.t1 | 8 | 5 | zf-H2C2_2 | 580 | 603 | 3.8e-06 | 26.9 | 0.0002 | 0.42 | 10.9 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 5 | zf-C2H2 | 592 | 613 | 7.5e-25 | 85.7 | 0.005 | 11.0 | 6.6 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 5 | zf-C2H2_4 | 592 | 610 | 4.6e-17 | 61.0 | 0.028 | 60.0 | 4.3 |
| pfu_aug1.0_473.1_15076.t1 | 8 | 6 | zf-H2C2_2 | 619 | 631 | 3.8e-06 | 26.9 | 0.0045 | 9.6 | 6.7 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 6 | zf-C2H2 | 620 | 642 | 7.5e-25 | 85.7 | 3.5e-07 | 0.00075 | 19.7 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 6 | zf-C2H2_4 | 620 | 642 | 4.6e-17 | 61.0 | 1.2e-05 | 0.025 | 14.9 |
| pfu_aug1.0_473.1_15076.t1 | 5 | 4 | zf-met | 620 | 642 | 4.1e-07 | 29.9 | 0.00092 | 1.9 | 8.7 |
| pfu_aug1.0_473.1_15076.t1 | 6 | 5 | zf-C2H2_jaz | 622 | 642 | 1.6e-06 | 28.1 | 0.078 | 160.0 | 2.5 |
| pfu_aug1.0_473.1_15076.t1 | 8 | 7 | zf-H2C2_2 | 645 | 656 | 3.8e-06 | 26.9 | 0.66 | 1400.0 | -0.2 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 7 | zf-C2H2 | 647 | 670 | 7.5e-25 | 85.7 | 5.5e-08 | 0.00012 | 22.2 |
| pfu_aug1.0_473.1_15076.t1 | 7 | 7 | zf-C2H2_4 | 647 | 670 | 4.6e-17 | 61.0 | 8.5e-05 | 0.18 | 12.2 |
| pfu_aug1.0_473.1_15076.t1 | 6 | 6 | zf-C2H2_jaz | 647 | 668 | 1.6e-06 | 28.1 | 0.059 | 120.0 | 2.9 |
| pfu_aug1.0_473.1_15076.t1 | 5 | 5 | zf-met | 649 | 667 | 4.1e-07 | 29.9 | 0.0051 | 11.0 | 6.4 |
| pfu_aug1.0_473.1_15076.t1 | 8 | 8 | zf-H2C2_2 | 661 | 673 | 3.8e-06 | 26.9 | 0.0052 | 11.0 | 6.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_473.1_15076.t1 | gi|291412729|ref|XP_002722631.1| | 1.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_473.1_15076.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_473.1_15076.t1 atgcgagatgttttttgaataactgaaaatgggaagcgaaatctgagaaaacgttcacagtcattcaaagtagtagataa ccagcttttctacacccccgtgaatgcttcaaaggaagatggtgagcctgaaatatcacgacctgtcatatcagacgaag aggaaattcagaaacttttatctgatctccatgtagatgaaaaagaacgaagtcggaccaatctgttgcccaacgatttt tccatattacggacctttaatattgattttctggcaggtatggtaaaattagaatcttcatttccagccttctttgaatt ttttatgaaccaaacttatgtgaatgatgcatctggaaatactttgtgcaatgtacatgtaggttcagatgctggtcatg ggataatgatgccgtcgagaatcgatgtcaaagttgaaggtccgtccagcaagtcagctgaagcacaccgcttctgggag atagttgaaatgaacgttcttgggccattcacatgtaaggagtcaaagtactatgttgtgttatttttggatcttttctc ctactggccagaggcatttgtggtggatagtctatctccatcaaccatcactcatcttcttctgaaactgctctgcagat ttggtaccatgggaactttgatgattcgacagacaagtgagtccgtccaagataacgtcagtccacgacaggatattctt tcattcctcggactagagatcaccattaaccactttggtgctgattctacatcagataaattgtatcgtgttggtatgga catcgatctgtctggtagtcagtttacaattgtgactttaacttgggagattccaataccagaaaagattcatcagcaaa atgaggcgtcaattacaacagtagaacctcatcttaacatggaacaaatgacaaaaattaccgatgtccttcttgaggcg tttaaaatgtttggtaaattttctcaacctctggagagctttcccatgagtcacatagagaatagggacgtagcaagtaa atcagaaagctcagcatctttggttagtaaggcttataatacacgtagatccagggacgttaattaccgtaggttatcta ctaatggggaggtggatccagaggcggaggaggatatgccgcccccaggcagtgtcacgcccgaaccacgacgaaaacgc aggaaaatgtccagacctggaagaatcaaggtggaagatgaaaaattagaggaaagtttgaaagaggaaactgatcaaga atccagcaaaaactcatccatggatgaagagacatgggaagctgtcagacgtaatatagcgcatcaagttttagccagtt ttcatcgtaatgcaactacagatttagcgagtcaatccgtgaagagtcctcctgaaccacccattaggaagagacacatt tgtgaagcttgcggtaaagaattttctcgatctgatactttgaaacgacatcgccgtgaaacacatgaaaatgaaagtac ttgtcctaacgtatgtaatgaatgtggtataacattcaaaaggaaagatcatcttcgaagacaccagaattgtgcacata aaggccaggtgctgcagtgcaagtactgtgaaaaaagctttgggacaaggaacaagctggactaccatgtcatgttggag cacgatagaaggttccaatgcgatctgtgtgataaaaggtttggatctagtactagctttaagcgacatttggctgcgca tgaaaattctgagtttcgttgcccttactgcctacaggactttgagaccaaagaagtcacaaaaatgcataaggaagtgt gtaagctgagtatgaagtaccaatgtaatgtgtgtggagaggcatttaaaagtaaaagctcgtaccagcatcatgaagcc tcgcattatgacggcaagtttccttgtcacacgtgtggcataaagttctcctttagtaccaaccttaacaggcatataag gactgtgcattccaaaaacccagatgatgatgcccccgtcaccactcagaaagaaacctctgtttgtatatcatctacag atgttccagcaccagtaaatgaagaggatgttgccagtgaacataattcagaacaaactgttccctctgaaacatatggg aaaactatcgatacagtgacagaaactgcaaaggaacctgacattcctcagacttgcaatgatcccatcactatttctag agaagttgcagacgctaattcacaaagagtttccgttaatttgcctggcggagacttacagcacatggaggagcagagtg tggaacacattaaggattcaatgatagaacatgcatctaagcttcacaaagctcttcatcatgaaagttataagagaagt gagcaacctccattaaaagcggtaacacattcggaacttcctcagactttttcctccctacagcacacttcctacccagg atcatcagtacctttcagcaacataggaaacttaagtacaggacatgaatcaaattaccagagagttccgttaccaagtg tcagtatattcaacagcaggggtgctttatcaacattgttcagatactctgatggggaaggttcgttaaaaattggcagc aacatgagtccatttagtggctatgcctctgacccaccttcaactaccactgtcaataacacaatgtcgtacagccatcc tgacccccctgttcacagtagtggtacagaccttcctctcagtcagacctttacagaccagagaactttggtcatgccaa tgccgatggcgggggtcagagatgctgcaatactaagtgctacattggaggggaaccgaactactcaggataacttggct tacggtttggatcaagattctgtatatcagaatcaatcgtctaatatttaccttgatagatctgattatgcccaagagaa attataa |
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Protein
| Protein ID | pfu_aug1.0_473.1_15076.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_473.1_15076.t1 MRDVFXITENGKRNLRKRSQSFKVVDNQLFYTPVNASKEDGEPEISRPVISDEEEIQKLLSDLHVDEKERSRTNLLPNDF SILRTFNIDFLAGMVKLESSFPAFFEFFMNQTYVNDASGNTLCNVHVGSDAGHGIMMPSRIDVKVEGPSSKSAEAHRFWE IVEMNVLGPFTCKESKYYVVLFLDLFSYWPEAFVVDSLSPSTITHLLLKLLCRFGTMGTLMIRQTSESVQDNVSPRQDIL SFLGLEITINHFGADSTSDKLYRVGMDIDLSGSQFTIVTLTWEIPIPEKIHQQNEASITTVEPHLNMEQMTKITDVLLEA FKMFGKFSQPLESFPMSHIENRDVASKSESSASLVSKAYNTRRSRDVNYRRLSTNGEVDPEAEEDMPPPGSVTPEPRRKR RKMSRPGRIKVEDEKLEESLKEETDQESSKNSSMDEETWEAVRRNIAHQVLASFHRNATTDLASQSVKSPPEPPIRKRHI CEACGKEFSRSDTLKRHRRETHENESTCPNVCNECGITFKRKDHLRRHQNCAHKGQVLQCKYCEKSFGTRNKLDYHVMLE HDRRFQCDLCDKRFGSSTSFKRHLAAHENSEFRCPYCLQDFETKEVTKMHKEVCKLSMKYQCNVCGEAFKSKSSYQHHEA SHYDGKFPCHTCGIKFSFSTNLNRHIRTVHSKNPDDDAPVTTQKETSVCISSTDVPAPVNEEDVASEHNSEQTVPSETYG KTIDTVTETAKEPDIPQTCNDPITISREVADANSQRVSVNLPGGDLQHMEEQSVEHIKDSMIEHASKLHKALHHESYKRS EQPPLKAVTHSELPQTFSSLQHTSYPGSSVPFSNIGNLSTGHESNYQRVPLPSVSIFNSRGALSTLFRYSDGEGSLKIGS NMSPFSGYASDPPSTTTVNNTMSYSHPDPPVHSSGTDLPLSQTFTDQRTLVMPMPMAGVRDAAILSATLEGNRTTQDNLA YGLDQDSVYQNQSSNIYLDRSDYAQEKL |
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