Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4732.1_16486
Locus scaffold4732.1 : 7432 ... 20535 : -
To GenomeBrowser scaffold4732.1:7432..20535
Genes list of scaffold scaffold4732.1
Synonym pfu_aug2.0_5.1_16667

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_4732.1_16486.t1
Definition-
>pfu_aug1.0_4732.1_16486.t1
atgggctcattgttagtgtacatctttgttccacaagacgtgtcggacgtattttacttagagcaggaacagttgatata
ttctctgtacgtagcccttgctctaggatctgcagtagggctgtttaaattgacgatttatcagtgtaaatcagggagta
agaaaaaagtgatgacataccaagaattgtgccaaaagcatgagatggttactgagacagtctcaaaaccaaagatctcg
gtgcgagatttgacaagtaaatctggagaatacatcaaaaagagtgtaactggggcatcagctagaagaggaagtaagca
gagttatgcacaagtaaaacagccgtccatgatatcagagaaaacggaaagaaggagtttacgatgggacgattctcaga
gtattatcaaggataagcagagtgaagttatattacaaaatctagagctaggacaaaaaccgtcactagtagctgacaaa
tctggaaatgccggtggtaacaaaaaaaatgtgagaaatccaaataaggaaataacaatgtgttcaggggacgcagaatt
cagtgaaagtgacacattgtcatacagcactaactattacaatcaagaggaaagactaccatgcaaaaagtattccacaa
aaggcagcaagcagcgtggtgtaggtgaagaaatggagaaaaataagaacagaacttttacaagggaaagtgaaaattta
cagaaattttgtggagagattttatttgccgtatcagaattactgcaagaagttagagttgatataatggaaggaaggtt
ttataaatgtgtgagaaggacagaggaccaagtgtatggtatttgcagacgtttagaagagggagtaaaggcgcaggctg
aatataaaagaaaaatgttatcaaactctttagaaggttcacagataccacaccagcctgaagaactattggtgatagag
gacagtcctttgttgttttggtgtggctccattaaaatcctaaatcagctgttagatagtgtaccacaatcatatagatg
gaaattcagggagagggacaagtgtacatcatatctagtcaataaagctaaggatcttgtcatgaactttgatgaatcac
agtttcagacagaatctcttcacaacacctcagaatataacagagaggaagtcatcatagacgatcatgtcagtattatt
atagaggaaacggaggactttacagaaataagaaaaaccatggctctagttctacaaatatccataaatcatgctttcat
gcagatgtttggggaagaaatggtcatccctttgtggagcatccaagattcaataagcacagatgacactgaagacttgc
tgcagtcattgttcgaaggtagatcggcaatgatacgtaccgtaggaaatttatgtaggagcgttatagagcaagctaca
gctgaacttttagaagatttccaggatccagtgtacgtgtatgtacagtttctagtcagacaggccatgcttagcgttct
gtcacatataaagcatatgacagttcccgagggaaaatatggaacagtactagatgaacttataaacgatctgaacaaga
aatggcagaaagaaggtttcagtcaattgcaacatatagacaaaaaccttgcacaacttttgctgtcgacacatctacag
aaacttatggagcaagaagttgagctgaataatgaattgtacgaatttttgcagaatatgacggctttgaagcgtttaga
aatagatatttgtaaagaactaaacagattggcataccaatgtataggagtgccagtcggaaaaagtgggaagttaggga
acctgagtcttgctgacattgtgccagcagatagaggtgacattgatgcagttgagttcataaacactaagaatacacaa
gatcgcaaatacagcgcgtgcagcgtgtccgttcagatttttcattaa

Protein
Protein IDpfu_aug1.0_4732.1_16486.t1
Definition-
>pfu_aug1.0_4732.1_16486.t1
MGSLLVYIFVPQDVSDVFYLEQEQLIYSLYVALALGSAVGLFKLTIYQCKSGSKKKVMTYQELCQKHEMVTETVSKPKIS
VRDLTSKSGEYIKKSVTGASARRGSKQSYAQVKQPSMISEKTERRSLRWDDSQSIIKDKQSEVILQNLELGQKPSLVADK
SGNAGGNKKNVRNPNKEITMCSGDAEFSESDTLSYSTNYYNQEERLPCKKYSTKGSKQRGVGEEMEKNKNRTFTRESENL
QKFCGEILFAVSELLQEVRVDIMEGRFYKCVRRTEDQVYGICRRLEEGVKAQAEYKRKMLSNSLEGSQIPHQPEELLVIE
DSPLLFWCGSIKILNQLLDSVPQSYRWKFRERDKCTSYLVNKAKDLVMNFDESQFQTESLHNTSEYNREEVIIDDHVSII
IEETEDFTEIRKTMALVLQISINHAFMQMFGEEMVIPLWSIQDSISTDDTEDLLQSLFEGRSAMIRTVGNLCRSVIEQAT
AELLEDFQDPVYVYVQFLVRQAMLSVLSHIKHMTVPEGKYGTVLDELINDLNKKWQKEGFSQLQHIDKNLAQLLLSTHLQ
KLMEQEVELNNELYEFLQNMTALKRLEIDICKELNRLAYQCIGVPVGKSGKLGNLSLADIVPADRGDIDAVEFINTKNTQ
DRKYSACSVSVQIFH

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495