Gene
| Gene Model ID | pfu_aug1.0_4739.1_37957 |
|---|---|
| Locus | scaffold4739.1 : 106 ... 4432 : + |
| To GenomeBrowser | scaffold4739.1:106..4432 |
| Genes list of scaffold | scaffold4739.1 |
| Synonym | pfu_aug2.0_2055.1_18663 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4739.1_37957.t1 | 2 | 1 | zf-C2H2_jaz | 4 | 26 | 5.3e-08 | 32.7 | 1.8e-06 | 0.0018 | 18.3 |
| pfu_aug1.0_4739.1_37957.t1 | 2 | 1 | zf-BED | 4 | 28 | 3.9e-07 | 29.7 | 7.5e-07 | 0.00074 | 19.2 |
| pfu_aug1.0_4739.1_37957.t1 | 2 | 1 | zf-C2H2 | 6 | 28 | 1.0e-10 | 41.3 | 6.7e-08 | 6.6e-05 | 23.0 |
| pfu_aug1.0_4739.1_37957.t1 | 2 | 1 | zf-C2H2_4 | 6 | 28 | 4.2e-10 | 39.2 | 3.9e-06 | 0.0038 | 17.4 |
| pfu_aug1.0_4739.1_37957.t1 | 1 | 1 | zf-Di19 | 6 | 58 | 1.4e-06 | 28.3 | 2.7e-09 | 2.7e-06 | 27.4 |
| pfu_aug1.0_4739.1_37957.t1 | 2 | 2 | zf-BED | 35 | 58 | 3.9e-07 | 29.7 | 4.5e-06 | 0.0044 | 16.7 |
| pfu_aug1.0_4739.1_37957.t1 | 2 | 2 | zf-C2H2 | 36 | 58 | 1.0e-10 | 41.3 | 1.8e-09 | 1.8e-06 | 27.9 |
| pfu_aug1.0_4739.1_37957.t1 | 2 | 2 | zf-C2H2_4 | 36 | 58 | 4.2e-10 | 39.2 | 8.8e-09 | 8.7e-06 | 25.7 |
| pfu_aug1.0_4739.1_37957.t1 | 2 | 2 | zf-C2H2_jaz | 36 | 56 | 5.3e-08 | 32.7 | 3.1e-05 | 0.03 | 14.4 |
Transcript
| Transcript ID | pfu_aug1.0_4739.1_37957.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4739.1_37957.t1 atggatggacaactagtatgtgagtactgcggaaaacaagtttcttcaaagagcaatttgaataagcatattcatgagag acactctgcatcactttctgtgttaatttgcagtttttgccagaaaccattcaagaggaggtataacttaaaacgacatt tgaggacagttcatgattcagaagagaagatggaagctaagagacgcaaaatggactataatgattatgcggactctagg aagcctgtgtatgtatcattactaagtgacctgcacgaggacatttcttcggaagaggaggaagacacaaggattgtgca atatgaagatgtttcggacgatgatattagcattggcgagatgttggtcaatgcatccgatgtgaataccaatgacatcc cggacgatatacaagatcgtataatcgatgcattggaccaggaagaagataggaggatcgttacgataccattgtatacc ttaccattacttcagactcagattgtaaaacacttcaggaggactaaacaaaactttggaaaatggaatttcaccccgac aaatgttccgtacttacagtttcggaaaagatga |
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Protein
| Protein ID | pfu_aug1.0_4739.1_37957.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4739.1_37957.t1 MDGQLVCEYCGKQVSSKSNLNKHIHERHSASLSVLICSFCQKPFKRRYNLKRHLRTVHDSEEKMEAKRRKMDYNDYADSR KPVYVSLLSDLHEDISSEEEEDTRIVQYEDVSDDDISIGEMLVNASDVNTNDIPDDIQDRIIDALDQEEDRRIVTIPLYT LPLLQTQIVKHFRRTKQNFGKWNFTPTNVPYLQFRKR |
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