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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4757.1_59596
Locus scaffold4757.1 : 32019 ... 37078 : -
To GenomeBrowser scaffold4757.1:32019..37078
Genes list of scaffold scaffold4757.1
Synonym pfu_aug2.0_400.1_00698

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4757.1_59596.t1 1 1 PKD_channel 2 109 4.5e-08 31.9 1.4e-11 5.2e-08 31.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4757.1_59596.t1 gi|350419456|ref|XP_003492188.1| PREDICTED: mucolipin-3-like [Bombus impatiens] 0.0

Transcript
Transcript IDpfu_aug1.0_4757.1_59596.t1
Definition-
>pfu_aug1.0_4757.1_59596.t1
atactgactgtggtactaaagaaagcattcccagacatgatgaggttcttggtgacaactctcatgttgtattttggttt
tatgttctgtggctgggtcgtacttggaccttaccatattaagttccgtcatctgagtacatcctcggagtgtttattct
cgttagttaacggagacgacatgtttgtgacgttttcagccacagtgacaaataacacagtggtgtggtactatagccgg
atattcctatatctatttatatctttgttcatctatgctgtactcaatctgttcattgctgttattttggatacttacga
aacaatcaaggagtattatgtggatggatttcctaagagtcctttatttgagtttgtggacgcgtgtgacgactcgccgg
attccttcttatacagaggagaggatcgtagctgttcctgtaggaactgtgctagcttcttatcaatgtttctatgctgc
tgtaaaaggttggtgtaa

Protein
Protein IDpfu_aug1.0_4757.1_59596.t1
Definition-
>pfu_aug1.0_4757.1_59596.t1
ILTVVLKKAFPDMMRFLVTTLMLYFGFMFCGWVVLGPYHIKFRHLSTSSECLFSLVNGDDMFVTFSATVTNNTVVWYYSR
IFLYLFISLFIYAVLNLFIAVILDTYETIKEYYVDGFPKSPLFEFVDACDDSPDSFLYRGEDRSCSCRNCASFLSMFLCC
CKRLV

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