Gene
| Gene Model ID | pfu_aug1.0_4759.1_45030 |
|---|---|
| Locus | scaffold4759.1 : 14419 ... 36806 : - |
| To GenomeBrowser | scaffold4759.1:14419..36806 |
| Genes list of scaffold | scaffold4759.1 |
| Synonym | pfu_aug2.0_3883.1_12539 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4759.1_45030.t1 | 3 | 1 | Pkinase | 1 | 178 | 4.79945e-42 | 143.9 | 2.8026e-45 | 9.99967e-42 | 142.8 |
| pfu_aug1.0_4759.1_45030.t1 | 2 | 1 | Pkinase_Tyr | 1 | 177 | 1.8e-27 | 96.0 | 1.9e-30 | 7.0e-27 | 94.1 |
| pfu_aug1.0_4759.1_45030.t1 | 2 | 2 | Pkinase_Tyr | 375 | 396 | 1.8e-27 | 96.0 | 0.35 | 1300.0 | -1.9 |
| pfu_aug1.0_4759.1_45030.t1 | 3 | 2 | Pkinase | 378 | 412 | 4.79945e-42 | 143.9 | 0.87 | 3200.0 | -3.1 |
| pfu_aug1.0_4759.1_45030.t1 | 3 | 3 | Pkinase | 379 | 416 | 4.79945e-42 | 143.9 | 0.3 | 1100.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4759.1_45030.t1 | gi|241813188|ref|XP_002414634.1| | serine/threonine protein kinase TAO1, putative [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4759.1_45030.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4759.1_45030.t1 ttggtgatggagtactgccttggctctgcctcagacatcgtggaagtacacaagaagccattgaaggaagtggagatatc ggctatatgttctgatgccttacaaggcctctgttacctacacagtcagggcaaaatacacagggatatcaaagctggaa atatactcctaacggaaaacggaactgtcaaattagctgattttgggtcggcatcgatatgttgtccggctaattccttc gttggcacaccatattggatggcccccgaggtaatactagcgatggatgaaggtcagtatgatgggaaagctgatgtgtg gtcactgggaataacgtgtattgaactggcagaacggaaacctccgttattcaatatgaacgctatgagtgcattatatc acatcgcccagaatgacccgcccacgctggctggaggagaatggacagaagatttcagaaactttgtcgactcttgtcta gccaaactaccctgtgatagaccatcttcggaagagatactcaatcacttatttttaacgcggcctcgtcccactcatgt gataatagacctaatacaacgcactaaggatgccgtgcgtgagttagataacttacaatataaccgagtgaagaaactat tgatgatagatgggaaggatacagactccgtatctaatggacccagcgatgagatttctgccgatgactcgtcacaggat gatgataacatagacagcagtaagtccagcagtatagccagtcagcagtcggccattagtaatagtagtaagtccagttc acagaacagcttacatggagctacaatggacgacggcagtattagctttgggggcagaaccacgtccagtaataatagaa gcctagaacccggtgccaataattttgctacaatccgtacgactcatatagtgagtagagagattaaggaacatgagcac tccaacgaactccgtgaacagtttactggttataaacgcatgagaaaacaacatcagaaacagctagctcagcaaaaaga gctacaaatcagaaggcagtttcgagaagccgtggaaacacagcggcgacagtataaggcattgaaggagcatgttgtta caagtacacctaaaggagagcagaaagccgttgtaaagaagctaaaagaagaacaacatcgtaagctgagcattttggga gaacaatacgaggccagtatagcggaaatgctccaacagcaaaatatgagattagatgactcccagctgaaggaagagca ggaacttaagcagcatcttcagcaggagttggagctcctcatggcatatcaaagtaaaatcaaaatgcagactgaggccc aacatcagagggaacgcaaacagctagaggagcgagtctcactacgcagagctctactagaatccaagatggaggaagaa aggaataaatttgcatcagagagaacagaaagaatccgaaaattacaagatcggcaggaacgggagttagagcaatttga cggtgaaagtgaagaaatgggattgaactctatagcagtgatagaggcatcgaaggaatctacatgttatgacgatgacg tcagtttgagagggagcatgataagcttgactccatctagtagtagtagttctttcacgtccacaacgtttcagtag |
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Protein
| Protein ID | pfu_aug1.0_4759.1_45030.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4759.1_45030.t1 LVMEYCLGSASDIVEVHKKPLKEVEISAICSDALQGLCYLHSQGKIHRDIKAGNILLTENGTVKLADFGSASICCPANSF VGTPYWMAPEVILAMDEGQYDGKADVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDPPTLAGGEWTEDFRNFVDSCL AKLPCDRPSSEEILNHLFLTRPRPTHVIIDLIQRTKDAVRELDNLQYNRVKKLLMIDGKDTDSVSNGPSDEISADDSSQD DDNIDSSKSSSIASQQSAISNSSKSSSQNSLHGATMDDGSISFGGRTTSSNNRSLEPGANNFATIRTTHIVSREIKEHEH SNELREQFTGYKRMRKQHQKQLAQQKELQIRRQFREAVETQRRQYKALKEHVVTSTPKGEQKAVVKKLKEEQHRKLSILG EQYEASIAEMLQQQNMRLDDSQLKEEQELKQHLQQELELLMAYQSKIKMQTEAQHQRERKQLEERVSLRRALLESKMEEE RNKFASERTERIRKLQDRQERELEQFDGESEEMGLNSIAVIEASKESTCYDDDVSLRGSMISLTPSSSSSSFTSTTFQ |
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