Gene
| Gene Model ID | pfu_aug1.0_4760.1_16509 |
|---|---|
| Locus | scaffold4760.1 : 27823 ... 33776 : - |
| To GenomeBrowser | scaffold4760.1:27823..33776 |
| Genes list of scaffold | scaffold4760.1 |
| Synonym | pfu_aug2.0_14.1_13382 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4760.1_16509.t1 | 1 | 1 | AAA_11 | 43 | 179 | 1.4e-12 | 47.6 | 3.1e-15 | 1.9e-12 | 47.2 |
| pfu_aug1.0_4760.1_16509.t1 | 1 | 1 | ResIII | 44 | 148 | 7.6e-06 | 25.8 | 2.0e-08 | 1.2e-05 | 25.1 |
| pfu_aug1.0_4760.1_16509.t1 | 1 | 1 | AAA_19 | 48 | 109 | 8.4e-11 | 41.4 | 2.7e-13 | 1.7e-10 | 40.5 |
| pfu_aug1.0_4760.1_16509.t1 | 1 | 1 | AAA_12 | 184 | 243 | 3.6e-14 | 52.6 | 1.0e-16 | 6.2e-14 | 51.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4760.1_16509.t1 | gi|351711865|gb|EHB14784.1| | Intron-binding protein aquarius [Heterocephalus glaber] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4760.1_16509.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4760.1_16509.t1 atgaagaggaaggacccagaatctgacccagtagacagaccacgtgccatagtccaaccacatgttataccaaatagggg accctacccttacaaccaaccaaaaaagaatgcgatccccttcacacccacccagatagaggccatacgggccgggatgc agcctggtctaaccatggtggtcgggccacctggtaccggtaaaactgacgtagctgtacaaatcatctcaaatttatac cataacttcccagaacagagaactctcattgtcacacactcaaaccaggcattgaaccagttatttgagaagatcatggc actcgacattgatgagcgacatttattacgactcggtcatggtgaggaagcattggagacagagaaagatttcagcagat acggaagagtaaattttgtgctggcacagaggttggagttattggaggaagtaggacgattacagaacagtcttaacgtt tcaggtgacatgtcatatacttgtgagacggctggctatttctacctgtatcaggtgctggctagatgggaagaatttca gagtaaattacgccaacaaaaggtaacaacagtggacaggtaccaaggacagcagaatgattatatactattgtcgttag taaggaccaaagctgtaggccatcttagggacgtgagaaggttggtagtagctatgtccagagctcgtcttggcctgtac gtcttcgctcgagtctcactgttcagtaactgctttgaactaacaccaacatttaacaagcttatgacccgaccattaca aatgcacataataccatctgaaagctacgctacaaaaggcaaaagaaagctgattgatcaagttacagagaaagtagtga ttattaaggacatgccagactttgcccagtttgtgtttgatttgtacaactccagaatctctcagctgatggcggatcac aatgccggaggagaggtacacgtgagagagttatctcgtcctcctaggcgatactaa |
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Protein
| Protein ID | pfu_aug1.0_4760.1_16509.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4760.1_16509.t1 MKRKDPESDPVDRPRAIVQPHVIPNRGPYPYNQPKKNAIPFTPTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNLY HNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALETEKDFSRYGRVNFVLAQRLELLEEVGRLQNSLNV SGDMSYTCETAGYFYLYQVLARWEEFQSKLRQQKVTTVDRYQGQQNDYILLSLVRTKAVGHLRDVRRLVVAMSRARLGLY VFARVSLFSNCFELTPTFNKLMTRPLQMHIIPSESYATKGKRKLIDQVTEKVVIIKDMPDFAQFVFDLYNSRISQLMADH NAGGEVHVRELSRPPRRY |
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