Gene
| Gene Model ID | pfu_aug1.0_4761.1_37961 |
|---|---|
| Locus | scaffold4761.1 : 1 ... 37118 : + |
| To GenomeBrowser | scaffold4761.1:1..37118 |
| Genes list of scaffold | scaffold4761.1 |
| Synonym | pfu_aug2.0_303.1_10582 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4761.1_37961.t1 | 2 | 1 | Ndr | 3 | 136 | 0.0 | 173.4 | 0.0 | 0.0 | 158.6 |
| pfu_aug1.0_4761.1_37961.t1 | 1 | 1 | Abhydrolase_6 | 3 | 115 | 1.4e-08 | 34.9 | 3.8e-12 | 1.4e-08 | 34.9 |
| pfu_aug1.0_4761.1_37961.t1 | 2 | 2 | Ndr | 152 | 172 | 0.0 | 173.4 | 6.4e-06 | 0.024 | 13.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4761.1_37961.t1 | gi|321465971|gb|EFX76969.1| | hypothetical protein DAPPUDRAFT_321849 [Daphnia pulex] | 3.9937e-43 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4761.1_37961.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4761.1_37961.t1 atacaatgtggcaaaacttcttgaaccacgcgtctatggcagagatcaacaagcgggcagcttacattcacatcgatgtc cctggtcaggaagacgatgccccggacttgccagctgatttcacctttccatctatgcagagccttggagaagatctagt ttgtgttctagaccaattaagtgtcaaacatgtcatatgtataggggaaggagcaggtgccaacatcgttgccaggtttg ctatagcacagccggaacgagtgcttggactgtgtttgatccactgtacagggacaacagccggatttatggaatcactt agagacaagttaattggatggaagctagaacatattggaatgaatcccactgctgaatcttacctgatgttacatagatt tggatcgcattggaaatatcctctacactttgtctacattgagtgtataattgattcattacagcctgacagactcgctg aatctttcctgtatttttgccaaggacttggaatcattggtggagtaccaatgcctaggatgcagcagagaaccagctct attgattcccctgatccagatgcccagcaactgaccaggagaactcgtagtatgtcaatggaggaggcagacaaaccact aggaatctattccaccagtcctaaaaacccatcaagcctgtctaccagccccacccgtaatctttcctcctccccacctg ccaactag |
|
Protein
| Protein ID | pfu_aug1.0_4761.1_37961.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4761.1_37961.t1 TMWQNFLNHASMAEINKRAAYIHIDVPGQEDDAPDLPADFTFPSMQSLGEDLVCVLDQLSVKHVICIGEGAGANIVARFA IAQPERVLGLCLIHCTGTTAGFMESLRDKLIGWKLEHIGMNPTAESYLMLHRFGSHWKYPLHFVYIECIIDSLQPDRLAE SFLYFCQGLGIIGGVPMPRMQQRTSSIDSPDPDAQQLTRRTRSMSMEEADKPLGIYSTSPKNPSSLSTSPTRNLSSSPPA N |
|