Gene
| Gene Model ID | pfu_aug1.0_4761.1_37963 |
|---|---|
| Locus | scaffold4761.1 : 60286 ... 64923 : + |
| To GenomeBrowser | scaffold4761.1:60286..64923 |
| Genes list of scaffold | scaffold4761.1 |
| Synonym | pfu_aug2.0_892.1_07992 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4761.1_37963.t1 | 1 | 1 | Tctex-1 | 10 | 71 | 1.0e-15 | 57.3 | 7.6e-20 | 1.1e-15 | 57.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4761.1_37963.t1 | gi|291220942|ref|XP_002730479.1| | PREDICTED: tctex1 domain-containing protein 2-like isoform X1 [Saccoglossus kowalevskii] | 2.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4761.1_37963.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4761.1_37963.t1 atgaaatatagattccgtcccatcattgtgaaagaggcaatccataacatacttaatgaacatttgactggtaaaaacta cgatgccgaggagacgacggaatggtcacgacaaatagctgatgaaatcaaagtcaagctcaaagaattaggttatgaca gatataaattcatagtacaagttgtaataggagaacaaagaggagaaggggtcaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_4761.1_37963.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4761.1_37963.t1 MKYRFRPIIVKEAIHNILNEHLTGKNYDAEETTEWSRQIADEIKVKLKELGYDRYKFIVQVVIGEQRGEGVK |
|