Gene
| Gene Model ID | pfu_aug1.0_4772.1_59600 |
|---|---|
| Locus | scaffold4772.1 : 13346 ... 30228 : + |
| To GenomeBrowser | scaffold4772.1:13346..30228 |
| Genes list of scaffold | scaffold4772.1 |
| Synonym | pfu_aug2.0_805.1_17846 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4772.1_59600.t1 | 3 | 1 | CH | 6 | 90 | 4.9e-18 | 65.1 | 2.4e-20 | 9.0e-17 | 61.0 |
| pfu_aug1.0_4772.1_59600.t1 | 3 | 1 | Spectrin | 118 | 224 | 6.1e-17 | 61.8 | 9.6e-12 | 3.6e-08 | 33.6 |
| pfu_aug1.0_4772.1_59600.t1 | 3 | 2 | CH | 127 | 145 | 4.9e-18 | 65.1 | 0.25 | 930.0 | -0.1 |
| pfu_aug1.0_4772.1_59600.t1 | 3 | 2 | Spectrin | 228 | 279 | 6.1e-17 | 61.8 | 6.9e-11 | 2.5e-07 | 30.9 |
| pfu_aug1.0_4772.1_59600.t1 | 3 | 3 | CH | 268 | 297 | 4.9e-18 | 65.1 | 0.47 | 1700.0 | -1.0 |
| pfu_aug1.0_4772.1_59600.t1 | 3 | 3 | Spectrin | 290 | 320 | 6.1e-17 | 61.8 | 0.15 | 570.0 | 0.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4772.1_59600.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4772.1_59600.t1 atgatatatccaggggtgaacatcactaattttaccaacagctggagaaacggactgggattcaatgctcttatacatgc tcacagaccagatttaatagactatgagagattacacccagaggaccacattggtaaccttaacaatgccttcaatgtgg cggccaatgaacttggaatacctaaaatcctggatgcagaggatgtggacgttacacggccggacgagaaggtcattatc acttacgtagcctcatattatcattactttgccaagatgaagagtgagatgacaggaggcaagaggattgccaagattgt cggcatgatgaaggacattgaaaacatggtagataattatgaaacactaacgtccagtttactcgagtggatcagaacta aaataggggagctcaacgatagggaattcccaaactcactagagggcgtacagaaactactcggtcgatttaaagaatac atcacaaaggaaaaaccacctaaatatcgagaaagaggaaatatagaagcccagttttttaacattcaggccaaacttaa agctaatggacagaaactttacacaccaccggagggtcagttaatacatgacatagagagtgcatggttacgactggaaa aagctgaacatgagagagaagtggctctcaggggacgaaatgatcagaaagatagattccgtgccttaaacagtttggcc aaggaacttgtagagggaaattatcatgcaagggagcaagtgaaaaaaaaggatgaagatataatgagaaaatggaaaga attattggaaaaattagagaggagaaaaaccacattatcaggatacaaaaactaccttacaatgttcagagaaatagaga acatacaggaggaattgaaagaagtagagatatcacctgagaagtttcggcctcaggagaacggtgaggcatcagatgaa gaggagtttgtagaggaggtcgtggaggtgccccatgaggtggaggtagaggagatcagggagagagaggtcatacagga tgtcgtggaaaccaggaagattcctcaggtcaaggccatgtacccatacaaaggtcaaggcatgaaagtggaaaaaggag aggtaagcttaaagaattcaagaattcaaatgtag |
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Protein
| Protein ID | pfu_aug1.0_4772.1_59600.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4772.1_59600.t1 MIYPGVNITNFTNSWRNGLGFNALIHAHRPDLIDYERLHPEDHIGNLNNAFNVAANELGIPKILDAEDVDVTRPDEKVII TYVASYYHYFAKMKSEMTGGKRIAKIVGMMKDIENMVDNYETLTSSLLEWIRTKIGELNDREFPNSLEGVQKLLGRFKEY ITKEKPPKYRERGNIEAQFFNIQAKLKANGQKLYTPPEGQLIHDIESAWLRLEKAEHEREVALRGRNDQKDRFRALNSLA KELVEGNYHAREQVKKKDEDIMRKWKELLEKLERRKTTLSGYKNYLTMFREIENIQEELKEVEISPEKFRPQENGEASDE EEFVEEVVEVPHEVEVEEIREREVIQDVVETRKIPQVKAMYPYKGQGMKVEKGEVSLKNSRIQM |
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