Gene
| Gene Model ID | pfu_aug1.0_4792.1_67059 |
|---|---|
| Locus | scaffold4792.1 : 1 ... 23445 : - |
| To GenomeBrowser | scaffold4792.1:1..23445 |
| Genes list of scaffold | scaffold4792.1 |
| Synonym | pfu_aug2.0_156.1_20337 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4792.1_67059.t1 | 4 | 1 | MgtE_N | 15 | 85 | 2.9e-06 | 27.5 | 0.0068 | 10.0 | 6.5 |
| pfu_aug1.0_4792.1_67059.t1 | 4 | 2 | MgtE_N | 100 | 177 | 2.9e-06 | 27.5 | 0.00032 | 0.48 | 10.7 |
| pfu_aug1.0_4792.1_67059.t1 | 4 | 3 | MgtE_N | 136 | 207 | 2.9e-06 | 27.5 | 0.00057 | 0.85 | 9.9 |
| pfu_aug1.0_4792.1_67059.t1 | 4 | 4 | MgtE_N | 232 | 274 | 2.9e-06 | 27.5 | 0.1 | 150.0 | 2.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4792.1_67059.t1 | gi|348686326|gb|EGZ26141.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4792.1_67059.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4792.1_67059.t1 atgaatgacttggagagtgatatcatgcaaatgatgtattatgttatagctaatttgacatcgaaaaattatccaacagt tataactaatttgacatcgaaaaattatccaacagttataactaatttgacatcgaaatattatccaacagttataactc atttcacaccgaagaattacccaacagttataactaatttgacatcgaagaattatccaacagttataattaatttgcca tcgaagaattattcaacagtgaaaattaatttgtcatcgaagaattacccaacagttataactaatttgacatcgaaaaa ttatccaacagttataactaatttgacatcgaaaaattacccaacagttataactaatttgacatcgaagaattacccaa cagtcataactaatttgacatcgaaaaattatcaaacagttataacttatttgacatcgaagaattactcaacagttata attaatttgccatcgaagaattatccaacagttataactaatttgacatcgaaatattatccaacagttataactcattt gacaccgaagaattacccaacagttataactaatttgacatcgaagaattatccaacagttataattaatttgccatcga agaattatccaacagtgaaaattaatttgtcatcgaagaattacccaacagttataactaatttgacatcgaaaaattat ccaacagttataactaatttgacatcgaaaaattacccaacagttataacttatttgacatcgaagaattactcaacagt tataactaatttttcatcgaagaattacccaacggatatgactcatttgacatcgaaaaattatccaacagtaataacta atttgtcatcgaagaattacccaacggtcccctatccgtcctttgctgtacatgtcaacactattttttccattgttttt ggtgttttgctgtgggtgctgcaaccaagtgtttgtaactttcctgattacactacttctcgttatacagtatcaattga ctgtaaagttggtgagtggtcgccatggactgatgcaggagatgcagggaagagaacaagaaagagagccatcataacga atcctcaatatggtggagagccttgtccagatttagaggacactgactatgttcctatagattgttacctgagtccatgg agtgaatggggacctgttgatgaagccacaggagagagaagacgaacaaggacaatcaccagacatcccatgaatggtgg taaagaatgtgaagatctggaagatactaaggaagtacctctggattgttacatgagtccctggagtgaatggggacctg tcaaggaaaccacaggagagagaagacgaacaaggacaatcaccagacatcccatgaatggtggtaaagaatgtgaagat ctggaagatactaaggaagttcctctagattgctatctcagtccatggagtgaatgggggcctattgatcaaactacagg catcagacgacgtacaagaacaatcaccaggcacccaatgaacggcgggaaagaatgcgaagatctggaggaaacaaaag aagaatctctggactgtatacttggtccctggggagcttggggtcctgtggatcagatcactgggaaaagaaaaagatca aggactgttacccgcaaaccagtgaatggcgggaaagcttgtgatgagctggaagaaactgaccttgaacctttggactg tattttgagtccttgggaagcctggggaccagttgatcaagtcactggtgaaagaaaacgaagcagaactgtgactcgca aaccaatgaatgggggcaaggaatgtgaagaattggacgagactgatctcg |
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Protein
| Protein ID | pfu_aug1.0_4792.1_67059.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4792.1_67059.t1 MNDLESDIMQMMYYVIANLTSKNYPTVITNLTSKNYPTVITNLTSKYYPTVITHFTPKNYPTVITNLTSKNYPTVIINLP SKNYSTVKINLSSKNYPTVITNLTSKNYPTVITNLTSKNYPTVITNLTSKNYPTVITNLTSKNYQTVITYLTSKNYSTVI INLPSKNYPTVITNLTSKYYPTVITHLTPKNYPTVITNLTSKNYPTVIINLPSKNYPTVKINLSSKNYPTVITNLTSKNY PTVITNLTSKNYPTVITYLTSKNYSTVITNFSSKNYPTDMTHLTSKNYPTVITNLSSKNYPTVPYPSFAVHVNTIFSIVF GVLLWVLQPSVCNFPDYTTSRYTVSIDCKVGEWSPWTDAGDAGKRTRKRAIITNPQYGGEPCPDLEDTDYVPIDCYLSPW SEWGPVDEATGERRRTRTITRHPMNGGKECEDLEDTKEVPLDCYMSPWSEWGPVKETTGERRRTRTITRHPMNGGKECED LEDTKEVPLDCYLSPWSEWGPIDQTTGIRRRTRTITRHPMNGGKECEDLEETKEESLDCILGPWGAWGPVDQITGKRKRS RTVTRKPVNGGKACDELEETDLEPLDCILSPWEAWGPVDQVTGERKRSRTVTRKPMNGGKECEELDETDL |
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