Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_480.1_65477
Locus scaffold480.1 : 19887 ... 41625 : -
To GenomeBrowser scaffold480.1:19887..41625
Genes list of scaffold scaffold480.1
Synonym pfu_aug2.0_10.1_00044

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 3
>Adult tissues
maleGonad 3

Transcript
Transcript IDpfu_aug1.0_480.1_65477.t1
Definition-
>pfu_aug1.0_480.1_65477.t1
atggtagtaactgaagtcactatcatcgatttaacgccagtgagcaaggccattggtcgaagttcattttcactacaatg
cgaagagcatcacaaacccttaagaacaaaaaatccttcggaggtagcttcctcacaagtagagaaagtagagaaagccg
ggaagcagccctccaccaaaataccagtcaaagggatgaaaggaagtctgatctcaacagccataagccaactctacttg
ccagacgaatatagaggaatcaatggcaccataagagatgatggagacaaagcttccgtcaaaatcactggattaaaaga
aaaaagtggccacatcctcaacatagacgcctccttgccaaaggtggattcattcaagagcggtgtaaaggcctacatta
accgaattatttccgatgccaaagataaggtatcaaaagagctggctctgacaatgcctaatgcaaagatagtcccgaac
aacagctccgcgatggacaaattacagatgccaaaatatgataatgtagaaaatggcagctctgttgacgccggatcttc
agctgttaacattcacaatgatgaagaacttgtaaaactgtcttctccgatggatcctcagcaaaagactgatttccaaa
gggtcactaacaacgatgaccgacatggagacatcctcaacccggaagagccatcgcagaagaagggatttaacattaaa
gatattaggtcgtacgtggaaaatatcgttatacaggccaaggaacgctttctcaaggaggagaaaaaggcctatataat
gccaacagtacagatgaagcaaaacttaaactccgcagtcgagagtctgaaagatattaatgaagaaaagggcaactctg
tcactgccggaattggatcttcatctttaaatatgaccgctgatggaaatcctggaaaaattcccaacctgaaagagcct
aaacaagaggcatatattgatcctaaaggtgttaagtcttacatcgaaggcatcattattaaggcccagaaactcgtgat
gaaagaaagtgatatagccatgcctacatcaaagatcttaccgagcatcaactcgactgttgaaaatattcagaaagcac
atgatgtcgaggtggaaaatgacaatgattttgatatttctatcggaccaacagccgttgccaatgacgacaatcatgga
aatattgccttttcggatgaatcttcacagaaaatggatttccacatgacaaatggcagtgaaagtcgactgggaaatgc
attgaaccaaagaaagtataacaaaacgacggatttcaacataaaagatgtcaagatttacatcgatcatgtcattattc
aggcaaaagagcggtttatcaaagagaatgaaatggccactgcaattccttcagcaaagattaaccctgacttatgcttg
tcagttggcagtttgaaggcaccaaaagacatccatgtagaaagtaccataaccaatgctgctggatttaactcatcacc
tgtagacaatgtcagtgatcgaaaaactgaatatcttccgttactgaaaaagtctcattttgacttgagtaatgtgaggg
cttacgttcaagacgtcatccttctggcgaagaaaagcattatcaaagaggaagaaatagcagcagcaatgtcgacagga
aataaacttcccagaatcagctcaaccgtcgtcaatgcacagatgccaagagatatcaaaagacaaaatagaaaggctat
cgacactggattcgaacgttctgttttcaacatggacggcttgggtacacgcggaaaaatcacaaatccgctcaagtcct
ctcaatcgactgatttcaacatagccactttcaatgaaagcgaacacgacactttccagaaccctagaccgtatgtacaa
aagacggatataaacattaaagatgtcaagtcatacatagggcatgtcgttcttcaggcaaagaaacaagtaatggagga
aaagcttatgatcactgcagcagctactacgggaaagtctgagaatcgtaaacctaagcccgtcatgaacaaagcaaact
tggaccataaccttacttctggaaccgagattggttcttctgtcgaacagtttgcctgcaatgacaaacagaatgttact
atcgaaaacagattaggatctgcctctgaaaacaggaccaacgatggagaacaaggaaacattcccactcaaatactgcc
aacacaagagaaacatacccaattggaggacgttaggtcttatgtccagcaagtcattattcaggcccagaacaagctta
ttcatgagaataacaaccctattccgatgtcttgtacagagaaaaatgatagtttcggacattctaccgtctgcaatgac
atactgcaaccacagactgtagcactaccaaagaacgtgttcaacataaacggcagcactatcagtacaaacgttggatc
ctctcctgtagacaatgacgatattggcaaacccgaaaacatcctagctgctggtttcaggtcttcaaatgaaaatattt
acactagtcagaaacaaggaaatgtcgaaacccacggatatctttcacaaaagaccgatttcaaattaaaggatgtaaag
tcttacgtcgaagaaatcattactcaggctcagaaaaaaatcatcaaagagaaaagcacgaccatggcgatgccagatgc
agagacaattaagaacttcagagattctaccgagaaactgcaagagagagttcgaacttctgaaagaattggcaatgata
ttgaggctgacaataaacatatgatcggaaatagtgccaagaaaaggagtaaagggaacactagagataccgtagagttg
caaatagatattgacaaagttgtctgctacataaagcaactgcttactgatgaccaaaaaatggcaatttatgagtattg
tcgttctaatgcaacttctgctactgaaatagatggaggcaacaggtcttactacattgaaaggatgcagctggaacgaa
acagcattgctatcgaaagtggcattggatcccttactgaaagcataaagtcttgtatccaacaaataattgatgatgca
aagagaaacatttccattggaaatggcatgtttacggataagctcaagattgtaacaaatgacaatatcgactccagttt
cgatgacaaagtcaagaatccaattgaaaatgacattaccaagcaggtttggagaagatcgtcagccggagacacaggtg
acatgcatttgaataattgcgattatctctctcttgaaaacgataggagaaaagaagaatcatacactgaacgaatgtgt
atcaaagctgaaaatcaaattgctgaagacaacaagcttatctttgggacatctggcgaaggagataaaatcaatctcga
aaatatgggaaataacgaggacaatgaagaaagtccctttgcaaaaacattatcacaagatatcgatcagaaaagtgtga
aatcttttccgatgaagataatgaaaaatgtaaaatcatttcataaaagagacggatggtcaactcagtgcaccgacgat
atgtcaaatttggattctgaccctgtggcaacaagacacttcgttgatgacattgatatggttgaagaaaaggcagattg
tgcaatacaatcaaacggaggcactggttcagtaggagagttgcaattagaaaaatgcactgcagaagatgataatcctg
ttggagcaagaatctcctgtgaagatttaattagcgatagccactctacttcttatacaatgatgtttgtccccactagc
cttcaactgaaggagggaataccacattcaaagactgaggtagaaatatcatcttgcatggaaaatctgcttgttggggt
tgaacgaacaagaactgaaggaaatgaagtgaaacatagtaacaattactgtgctatgacacaaacttcatcttcatgca
atacgatgaataatgtagaggaaaacaacccaccaatatctgcttgcacattgaacgagtactcgagtttggaccacaaa
gagaacgacattgtcaaaggtttacacactataatggcgttatctagaaaagagaatgaaagttcccagttaccaacatt
tttagaggagtcacggttcagtgacaattctaccacagaagcgttatgcaagcctgtaaaacggtacgtcccttgcatca
tggaccaaaataaagacaaagtatctccagatgggtcacggaaaagattagaagttccaacaacggctaaactaccgact
cttccttgcaaacctaaagaatcaaaacatgacaaggggaaatcgaagccaacaaaactttccgacaaagaggccctatc
taccctcactagacttccaagtaaaccaactatcatgaagacttcagtgatggccagcgtgaaacctgctgagccaaaag
gaaatcattttgaaatgaagcatggcaactggaagaatcgatcgcaatgcaaagtcaacaaagtcggcgaaatagttgaa
ctcagggaaaatatgaaacagtaccatcaccagaacagaccggtgtcagttagaaagtccgcagccatgtcagtcgtcca
ggcaatgcttatggagaagaccgacgatcatgtccagtccggagttagcgatgaccaagtaatacgttctcctgaaaatg
gacgaagatctgatgacatctttccaaaatcacgtttaagtgctatccacggcgaaaatcaacaaattgaaaagaagttt
ggacccttggaatctgcagaccaggacacgtatgaaaaggagagaataaaatcaacatgctctcctcctcctcctcttcc
tgaaaatgaccagtcaaaatgtcagcagacatcttctatagaaaaaatagaagaaaatccattaatgcctatactacaca
tgcaccagaatgagaaaagcgtgaaacagtatcgccaaaatactaacagaaatgaagcaaaactcagtccagaaaagcaa
gaagaaactattgtcaaacaaacagatcctgaatcagtcaaatcctcttctggtgtttctaaaggaagaactgaaaggat
ttcgctggaaagcaggccagattcaagcccacttcaaagtcaaccaaatctgactattatctgcaatgataatcaaggaa
caagagcaaagactgaatcccaggaatcagcagacgagaaggaacttcccaattcctccatatttctcgagtcatgccct
ggtaaaggtcccttgcctccaattcgaaatcaaattacccaagatgtaaaaggagaggagactattcaatcgttaccaaa
ccgtagattgcctataattgtggataatagcattaaaaatagaccgccgtggaatgcatcacaaaaactgagattagaat
gggaagaggcacggctcaaagttgaagatttcttgtctgcatctaaattcagcaagtacaagccacttccggacatctct
aagtcagacggtagtaaaaagaccaaaatcggtcagctgaatgacatcatgggtaaagacggaaagttgaaaaatcgtaa
taccacattacaaaagtcatcattattgccgtctattaatacaagtggtcagatcaaagaattaactgggaacactaaga
tcaccagtaaagtcgcgaggagaccaaacaacactgatatatcaagtgcaaaaacgagtgcaaggagacgtaaaacacat
agactgtctacgtcgactttcagcaatgaaattaaatataccggccgagacaacgaaaataaagtggaaacgggaggttc
tacaggaacaaacaaaaatgaaaataacagaacagaatctcgatatactgttccagtgtctagcctttcatattccggag
aaactgttgcttttgtgagtgaaagcgcaattagctcagaatctagcattttgttgaacaatttcatggatgtacattcc
ccaagatttatttctgcttcatcagtgtctgcagtatcctcagacagtagtacgttaacaacatctagccggttggattg
tgctccaagaggaaagctcatattgaatccagacaatccattcctaggcaaataccaagccaatatctatatgcccggtg
ttactgatggatacgatgaacataaatctagtagagacagcaaatgtgatgatgaactagaaaacatgtctcaaacgtct
ttagatcccgctatccgtgcggcgagatttccttggagacacaatgatgtcaaagactctgatttgccgttcttgacacc
accattatattcatgttcaaaccggcctagaagaattgtagagtcttcattcaaaggtgtatctgttgtgagattatctg
attgtggaaacattcgactccataaagacaaaatgggcgagaaaacagtcccataa

Protein
Protein IDpfu_aug1.0_480.1_65477.t1
Definition-
>pfu_aug1.0_480.1_65477.t1
MVVTEVTIIDLTPVSKAIGRSSFSLQCEEHHKPLRTKNPSEVASSQVEKVEKAGKQPSTKIPVKGMKGSLISTAISQLYL
PDEYRGINGTIRDDGDKASVKITGLKEKSGHILNIDASLPKVDSFKSGVKAYINRIISDAKDKVSKELALTMPNAKIVPN
NSSAMDKLQMPKYDNVENGSSVDAGSSAVNIHNDEELVKLSSPMDPQQKTDFQRVTNNDDRHGDILNPEEPSQKKGFNIK
DIRSYVENIVIQAKERFLKEEKKAYIMPTVQMKQNLNSAVESLKDINEEKGNSVTAGIGSSSLNMTADGNPGKIPNLKEP
KQEAYIDPKGVKSYIEGIIIKAQKLVMKESDIAMPTSKILPSINSTVENIQKAHDVEVENDNDFDISIGPTAVANDDNHG
NIAFSDESSQKMDFHMTNGSESRLGNALNQRKYNKTTDFNIKDVKIYIDHVIIQAKERFIKENEMATAIPSAKINPDLCL
SVGSLKAPKDIHVESTITNAAGFNSSPVDNVSDRKTEYLPLLKKSHFDLSNVRAYVQDVILLAKKSIIKEEEIAAAMSTG
NKLPRISSTVVNAQMPRDIKRQNRKAIDTGFERSVFNMDGLGTRGKITNPLKSSQSTDFNIATFNESEHDTFQNPRPYVQ
KTDINIKDVKSYIGHVVLQAKKQVMEEKLMITAAATTGKSENRKPKPVMNKANLDHNLTSGTEIGSSVEQFACNDKQNVT
IENRLGSASENRTNDGEQGNIPTQILPTQEKHTQLEDVRSYVQQVIIQAQNKLIHENNNPIPMSCTEKNDSFGHSTVCND
ILQPQTVALPKNVFNINGSTISTNVGSSPVDNDDIGKPENILAAGFRSSNENIYTSQKQGNVETHGYLSQKTDFKLKDVK
SYVEEIITQAQKKIIKEKSTTMAMPDAETIKNFRDSTEKLQERVRTSERIGNDIEADNKHMIGNSAKKRSKGNTRDTVEL
QIDIDKVVCYIKQLLTDDQKMAIYEYCRSNATSATEIDGGNRSYYIERMQLERNSIAIESGIGSLTESIKSCIQQIIDDA
KRNISIGNGMFTDKLKIVTNDNIDSSFDDKVKNPIENDITKQVWRRSSAGDTGDMHLNNCDYLSLENDRRKEESYTERMC
IKAENQIAEDNKLIFGTSGEGDKINLENMGNNEDNEESPFAKTLSQDIDQKSVKSFPMKIMKNVKSFHKRDGWSTQCTDD
MSNLDSDPVATRHFVDDIDMVEEKADCAIQSNGGTGSVGELQLEKCTAEDDNPVGARISCEDLISDSHSTSYTMMFVPTS
LQLKEGIPHSKTEVEISSCMENLLVGVERTRTEGNEVKHSNNYCAMTQTSSSCNTMNNVEENNPPISACTLNEYSSLDHK
ENDIVKGLHTIMALSRKENESSQLPTFLEESRFSDNSTTEALCKPVKRYVPCIMDQNKDKVSPDGSRKRLEVPTTAKLPT
LPCKPKESKHDKGKSKPTKLSDKEALSTLTRLPSKPTIMKTSVMASVKPAEPKGNHFEMKHGNWKNRSQCKVNKVGEIVE
LRENMKQYHHQNRPVSVRKSAAMSVVQAMLMEKTDDHVQSGVSDDQVIRSPENGRRSDDIFPKSRLSAIHGENQQIEKKF
GPLESADQDTYEKERIKSTCSPPPPLPENDQSKCQQTSSIEKIEENPLMPILHMHQNEKSVKQYRQNTNRNEAKLSPEKQ
EETIVKQTDPESVKSSSGVSKGRTERISLESRPDSSPLQSQPNLTIICNDNQGTRAKTESQESADEKELPNSSIFLESCP
GKGPLPPIRNQITQDVKGEETIQSLPNRRLPIIVDNSIKNRPPWNASQKLRLEWEEARLKVEDFLSASKFSKYKPLPDIS
KSDGSKKTKIGQLNDIMGKDGKLKNRNTTLQKSSLLPSINTSGQIKELTGNTKITSKVARRPNNTDISSAKTSARRRKTH
RLSTSTFSNEIKYTGRDNENKVETGGSTGTNKNENNRTESRYTVPVSSLSYSGETVAFVSESAISSESSILLNNFMDVHS
PRFISASSVSAVSSDSSTLTTSSRLDCAPRGKLILNPDNPFLGKYQANIYMPGVTDGYDEHKSSRDSKCDDELENMSQTS
LDPAIRAARFPWRHNDVKDSDLPFLTPPLYSCSNRPRRIVESSFKGVSVVRLSDCGNIRLHKDKMGEKTVP

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495