Gene
| Gene Model ID | pfu_aug1.0_48049.1_70623 |
|---|---|
| Locus | scaffold48049.1 : 1 ... 4439 : - |
| To GenomeBrowser | scaffold48049.1:1..4439 |
| Genes list of scaffold | scaffold48049.1 |
| Synonym | pfu_aug2.0_262.1_07247 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_48049.1_70623.t1 | 1 | 1 | DJ-1_PfpI | 1 | 73 | 6.7e-23 | 80.7 | 1.5e-26 | 7.3e-23 | 80.6 |
| pfu_aug1.0_48049.1_70623.t1 | 1 | 1 | DUF4066 | 2 | 55 | 1.7e-06 | 27.4 | 3.9e-10 | 1.9e-06 | 27.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_48049.1_70623.t1 | gi|340378796|ref|XP_003387913.1| | PREDICTED: protein DJ-1 homolog D-like [Amphimedon queenslandica] | 2.0e-24 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_48049.1_70623.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_48049.1_70623.t1 gaaagcctgtagctgcgatatgccatggtgcctggatgttctgctccgccaagttactaaaagggaaacgtgctacgtgt tttgtcgcaataaaagatgacgttgagaatgcaggcgctatctatgaggataagccagtggttgtggatggtaatatgat tacgtcacggatcccacaggatctcccggagttttgtaaagccatcatagcgcaactcaaaggctga |
|
Protein
| Protein ID | pfu_aug1.0_48049.1_70623.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_48049.1_70623.t1 KPVAAICHGAWMFCSAKLLKGKRATCFVAIKDDVENAGAIYEDKPVVVDGNMITSRIPQDLPEFCKAIIAQLKG |
|