Gene
| Gene Model ID | pfu_aug1.0_4809.1_08990 |
|---|---|
| Locus | scaffold4809.1 : 41216 ... 43246 : + |
| To GenomeBrowser | scaffold4809.1:41216..43246 |
| Genes list of scaffold | scaffold4809.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4809.1_08990.t1 | 1 | 1 | C1q | 57 | 182 | 3.0e-24 | 85.4 | 5.4e-28 | 4.0e-24 | 85.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4809.1_08990.t1 | gi|325504371|emb|CBX41685.1| | putative C1q domain containing protein MgC1q36 [Mytilus galloprovincialis] | 1.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4809.1_08990.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4809.1_08990.t1 atgcagacgattcatattctattgtcgactatttatctctttacagagatatctacccacaagtctgtgcagaggaagtt ttctagacacgacaaactagaccttttgaaagagatcatcggtcgatactttcttcgagaagaaaaatatgataatcatc gaagcgttgcatttgctgtaaagttgcgcagctccatgtcaggcgttcctaaaaatattgtcataaaatttgaggatgtg gttacaaaccaagggaatgggtacgacaaggttacagggacattcacggccccggtatctggaacatacctctttggttg gcataccttggtaaataaaggagggaaggcacatgtccatctctttgtcaatggtgtagatacatggagaagttatgctg acgaaccaggtaaagaatacgaacctacaagcgcaacagtagtactgcagttgaaaaaggatgccacagtgcaactgaga actgcccacagtaatggaaattatatatatggagatggatacagcggatttacagggatcctggtcaacgcataa |
|
Protein
| Protein ID | pfu_aug1.0_4809.1_08990.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4809.1_08990.t1 MQTIHILLSTIYLFTEISTHKSVQRKFSRHDKLDLLKEIIGRYFLREEKYDNHRSVAFAVKLRSSMSGVPKNIVIKFEDV VTNQGNGYDKVTGTFTAPVSGTYLFGWHTLVNKGGKAHVHLFVNGVDTWRSYADEPGKEYEPTSATVVLQLKKDATVQLR TAHSNGNYIYGDGYSGFTGILVNA |
|