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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4815.1_37985
Locus scaffold4815.1 : 20786 ... 60166 : +
To GenomeBrowser scaffold4815.1:20786..60166
Genes list of scaffold scaffold4815.1
Synonym pfu_aug2.0_28.1_26701

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 3
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_4815.1_37985.t1
Definition-
>pfu_aug1.0_4815.1_37985.t1
atggctttaacccgaaacgagcatatctggtccatgctgcaaatttatctgttcttaaatgatgctatgaatttgaagac
gtgtaacatttgtacaacttgacgtttacatgtacatcaatatgtacatcgacacattcaccaagttctaccagttttca
tgaaactgaaacagaagacgttgactctcccatggcacctggtctcacttcggaatactgattatttcgggattcgcagt
cgttcccattcgttcccatggtccattcctactcactttccgtccattcctggatgtgcctttcctaaaccaatcattga
gcgcaggttatcacggtacgatgctaatgaatttgagggtgggatcaaatcccttattcaggccatatcagttggagaac
tgtcgatcgtggaatcaatcatggaggaaatcaaagacactgttaccttgttaaataaagacatgtttcatgttatcatg
gctgcggtgaagactggtgatccacttattgtttccagagttatgcaagaagttaaagccaggcgatactttcctgttag
gtgtttgacctctgtatttatggaggctatccgtaccaagaacgttgatatattaagaagtgttaaatctataagaccca
aaatattcattccagaagaagatgtcgttcaacttgtttttgaagctgtgaatactgatgaccctgctattgttctagag
cttgtaaagagccgacacttcaaaaagaaactaagcagtgagaatgcattccaagtcttaacaaaagcgcttagttcatc
agacccttctattatatcctcagtcgtctctcatttcaaaccaaagaaccagttatccgtggagcacaaacttacgatat
tgcgttatgccataaagatccatcatctacaaactgtccagttttgttttagattaaaatcatttcttctgcctgaagac
gctaaggaaattctattggcagctgcgaggtcatctcccgatgtcttcaattttgtctgtgatactctacatccaattct
gaacgaaatacccatccaacagttactcagaatcgcgatgcaggcgaagaaagtcggaatagtacaaaaaataatgcaaa
aattcaaaattttagatcaaactttaatagaacttcttttattacatttgcgaggatatgatcccgatgagaatattttg
attgtaatgcttcatgaaatacacgttctatcgcattccattgcaacagagatcttatctgcgatcataattcatgattt
tcttaatgcagtgtcggctttccattgggattcttgtcggagaaaccttccaaatacaatcgtagcagctctcgttcatg
caacagatttttcaagaaattcagtttccgaggacacatcggaaaacgatatcggagagagatcatctagcgaaacagga
agcagaaaatcacgtgatcattcctccgccataagtagtaacatcggaaatagtcaatcacgtgatcactctgcagttat
acaaaaaattattttcaaatgtagatcattcgatagttgtatcgttaaacaaataattatggtattatctcttaacaaga
atataggatgcctagatatttttcttggatcgttaaacaatctttcggaggatgatgcacgtgaagtcatctatttcgtc
gctcagtctttggacaaggtcgatgtggttgagattctagtcaaatattgcaagtcaatatcactggagaaccttgatga
atgtatacgtcgttgtcaacatgataatgttaggcagcttttaatattgcacaggcgccagattgtgaccgagcaatttc
ggaagcactatggagaagttctgaaagaggctcatcgtctagtcatgatagcagcttgtcctatgctacagcacatggag
aatgcttccctcggctctcatctggaagttcgcctttcctctgacatcagtgtgacatcaatcaaaatgttcctgcaata
tctgtatgagggctttatgaagttaacggaggagaattataaagaaattgagaaaatcagcaaagttttacaagttgaca
gtataaccaaatgttgcattgattttgccaaatgcttaagacaacagagtgatcagcattatcctgatgtcaatgaattt
ggcatacaagagcaggcagaattcaaatttgttaaagcaactgatcttgagaaaacattttcttcagcagataatacagg
tgactttggctcttcaaataagcgacccagagtacagtcaggtagacgggagtccacaggattggactacccatcaagaa
attatcaagaagataggagagcaggttttggctcctcaagtcagaatcaacagtcaacgcattcagaacctattgaaatt
ttagatgatggcgtagaagttataaattcagagccagcacagagggatgaggaaggctggccggtaccatcaagtcaacc
ccctttacagcacagtatgggggtaggtgtcagtacccaatctgggacacagcctgatgtgagggttataagtatatctg
atcatgatgtctcaattcctgtctccacaccgcctatcagccagacgtctcaaccacaggaaactccacaacatacaggt
tttacgtctcatgccagtaccaaagtaacagagcagcttgggacaatacagcctatgactggtatagatgtaccagtaca
acaaagagtttctcagtcctcacccttcaccaccagtactccgtgccagcttgtaccagtgtcggccaatcaaagaaagc
cattcgctgcaggaaatgaatctcaactgaatgtttctaaagatgtagatccaagcgtatatactgttgggaattaccat
ggtgttcctgagtctaatttggttgacaccagtgatacatcaggtttgacgcaagtacctaccaccagtgaaggtagaaa
tgaaagttcttatatggaacatgatcaaggcttccaagattcagaaatcagtattattaaagtagaacatttgtctggag
gagagagtatagaaatggggcttgaggaaggtagaccacctgatcaatcagaaatgatatacgtgcaaaaagctccctct
agtgacaatgaaggggaaggggaagaatactctaacgaagcgagcaatatgatagaaggagcgtcgggaatacaaaatac
ttcattacagcaggatatcaaaggatggccatcattgaacaatatcatgtactttcagaatttttgcatgattcaagtgt
ccaaactgaaatttcttttcatgacaaagttttaa

Protein
Protein IDpfu_aug1.0_4815.1_37985.t1
Definition-
>pfu_aug1.0_4815.1_37985.t1
MALTRNEHIWSMLQIYLFLNDAMNLKTCNICTTXRLHVHQYVHRHIHQVLPVFMKLKQKTLTLPWHLVSLRNTDYFGIRS
RSHSFPWSIPTHFPSIPGCAFPKPIIERRLSRYDANEFEGGIKSLIQAISVGELSIVESIMEEIKDTVTLLNKDMFHVIM
AAVKTGDPLIVSRVMQEVKARRYFPVRCLTSVFMEAIRTKNVDILRSVKSIRPKIFIPEEDVVQLVFEAVNTDDPAIVLE
LVKSRHFKKKLSSENAFQVLTKALSSSDPSIISSVVSHFKPKNQLSVEHKLTILRYAIKIHHLQTVQFCFRLKSFLLPED
AKEILLAAARSSPDVFNFVCDTLHPILNEIPIQQLLRIAMQAKKVGIVQKIMQKFKILDQTLIELLLLHLRGYDPDENIL
IVMLHEIHVLSHSIATEILSAIIIHDFLNAVSAFHWDSCRRNLPNTIVAALVHATDFSRNSVSEDTSENDIGERSSSETG
SRKSRDHSSAISSNIGNSQSRDHSAVIQKIIFKCRSFDSCIVKQIIMVLSLNKNIGCLDIFLGSLNNLSEDDAREVIYFV
AQSLDKVDVVEILVKYCKSISLENLDECIRRCQHDNVRQLLILHRRQIVTEQFRKHYGEVLKEAHRLVMIAACPMLQHME
NASLGSHLEVRLSSDISVTSIKMFLQYLYEGFMKLTEENYKEIEKISKVLQVDSITKCCIDFAKCLRQQSDQHYPDVNEF
GIQEQAEFKFVKATDLEKTFSSADNTGDFGSSNKRPRVQSGRRESTGLDYPSRNYQEDRRAGFGSSSQNQQSTHSEPIEI
LDDGVEVINSEPAQRDEEGWPVPSSQPPLQHSMGVGVSTQSGTQPDVRVISISDHDVSIPVSTPPISQTSQPQETPQHTG
FTSHASTKVTEQLGTIQPMTGIDVPVQQRVSQSSPFTTSTPCQLVPVSANQRKPFAAGNESQLNVSKDVDPSVYTVGNYH
GVPESNLVDTSDTSGLTQVPTTSEGRNESSYMEHDQGFQDSEISIIKVEHLSGGESIEMGLEEGRPPDQSEMIYVQKAPS
SDNEGEGEEYSNEASNMIEGASGIQNTSLQQDIKGWPSLNNIMYFQNFCMIQVSKLKFLFMTKF

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Okinawa Institute of Science and Technology
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