Gene
| Gene Model ID | pfu_aug1.0_4815.1_37986 |
|---|---|
| Locus | scaffold4815.1 : 74518 ... 86735 : - |
| To GenomeBrowser | scaffold4815.1:74518..86735 |
| Genes list of scaffold | scaffold4815.1 |
| Synonym | pfu_aug2.0_2729.1_32282 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4815.1_37986.t1 | 8 | 1 | zf-C2H2 | 271 | 293 | 6.1e-26 | 89.1 | 0.0025 | 4.7 | 7.7 |
| pfu_aug1.0_4815.1_37986.t1 | 9 | 1 | zf-H2C2_2 | 271 | 281 | 2.1e-20 | 71.9 | 0.22 | 400.0 | 1.5 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 1 | zf-C2H2_4 | 271 | 289 | 4.8e-15 | 54.6 | 0.025 | 47.0 | 4.6 |
| pfu_aug1.0_4815.1_37986.t1 | 9 | 2 | zf-H2C2_2 | 285 | 322 | 2.1e-20 | 71.9 | 0.00074 | 1.4 | 9.3 |
| pfu_aug1.0_4815.1_37986.t1 | 7 | 1 | zf-C2H2_jaz | 310 | 330 | 4.7e-12 | 45.6 | 4.3e-06 | 0.0079 | 16.3 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 2 | zf-C2H2 | 311 | 332 | 6.1e-26 | 89.1 | 3.1e-06 | 0.0057 | 16.9 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 2 | zf-C2H2_4 | 311 | 330 | 4.8e-15 | 54.6 | 1.8e-05 | 0.033 | 14.4 |
| pfu_aug1.0_4815.1_37986.t1 | 9 | 3 | zf-H2C2_2 | 327 | 345 | 2.1e-20 | 71.9 | 0.011 | 21.0 | 5.6 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 3 | zf-C2H2 | 339 | 361 | 6.1e-26 | 89.1 | 0.00038 | 0.71 | 10.3 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 3 | zf-C2H2_4 | 339 | 361 | 4.8e-15 | 54.6 | 0.0013 | 2.5 | 8.6 |
| pfu_aug1.0_4815.1_37986.t1 | 7 | 2 | zf-C2H2_jaz | 340 | 358 | 4.7e-12 | 45.6 | 0.001 | 1.9 | 8.7 |
| pfu_aug1.0_4815.1_37986.t1 | 9 | 4 | zf-H2C2_2 | 354 | 378 | 2.1e-20 | 71.9 | 0.00062 | 1.1 | 9.6 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 4 | zf-C2H2 | 368 | 391 | 6.1e-26 | 89.1 | 1.4e-09 | 2.6e-06 | 27.4 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 4 | zf-C2H2_4 | 368 | 388 | 4.8e-15 | 54.6 | 2.1e-05 | 0.04 | 14.2 |
| pfu_aug1.0_4815.1_37986.t1 | 7 | 3 | zf-C2H2_jaz | 370 | 388 | 4.7e-12 | 45.6 | 0.00076 | 1.4 | 9.1 |
| pfu_aug1.0_4815.1_37986.t1 | 9 | 5 | zf-H2C2_2 | 383 | 408 | 2.1e-20 | 71.9 | 0.00022 | 0.4 | 11.0 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 5 | zf-C2H2 | 397 | 420 | 6.1e-26 | 89.1 | 0.0003 | 0.55 | 10.6 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 5 | zf-C2H2_4 | 397 | 415 | 4.8e-15 | 54.6 | 0.022 | 40.0 | 4.8 |
| pfu_aug1.0_4815.1_37986.t1 | 7 | 4 | zf-C2H2_jaz | 397 | 415 | 4.7e-12 | 45.6 | 0.091 | 170.0 | 2.5 |
| pfu_aug1.0_4815.1_37986.t1 | 9 | 6 | zf-H2C2_2 | 412 | 439 | 2.1e-20 | 71.9 | 0.00045 | 0.83 | 10.0 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 6 | zf-C2H2 | 429 | 450 | 6.1e-26 | 89.1 | 7.9e-07 | 0.0015 | 18.7 |
| pfu_aug1.0_4815.1_37986.t1 | 7 | 5 | zf-C2H2_jaz | 429 | 448 | 4.7e-12 | 45.6 | 1.4e-05 | 0.026 | 14.6 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 6 | zf-C2H2_4 | 430 | 451 | 4.8e-15 | 54.6 | 4.6e-06 | 0.0085 | 16.3 |
| pfu_aug1.0_4815.1_37986.t1 | 9 | 7 | zf-H2C2_2 | 442 | 466 | 2.1e-20 | 71.9 | 1.7e-10 | 3.1e-07 | 30.3 |
| pfu_aug1.0_4815.1_37986.t1 | 7 | 6 | zf-C2H2_jaz | 455 | 466 | 4.7e-12 | 45.6 | 0.019 | 36.0 | 4.6 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 7 | zf-C2H2 | 456 | 478 | 6.1e-26 | 89.1 | 3.8e-06 | 0.007 | 16.6 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 7 | zf-C2H2_4 | 456 | 478 | 4.8e-15 | 54.6 | 0.00012 | 0.22 | 11.9 |
| pfu_aug1.0_4815.1_37986.t1 | 9 | 8 | zf-H2C2_2 | 471 | 495 | 2.1e-20 | 71.9 | 3.4e-09 | 6.2e-06 | 26.2 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 8 | zf-C2H2 | 484 | 507 | 6.1e-26 | 89.1 | 4.4e-06 | 0.0081 | 16.4 |
| pfu_aug1.0_4815.1_37986.t1 | 8 | 8 | zf-C2H2_4 | 484 | 507 | 4.8e-15 | 54.6 | 0.0005 | 0.93 | 9.9 |
| pfu_aug1.0_4815.1_37986.t1 | 7 | 7 | zf-C2H2_jaz | 484 | 503 | 4.7e-12 | 45.6 | 0.00062 | 1.2 | 9.4 |
| pfu_aug1.0_4815.1_37986.t1 | 9 | 9 | zf-H2C2_2 | 498 | 508 | 2.1e-20 | 71.9 | 0.86 | 1600.0 | -0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4815.1_37986.t1 | gi|334349832|ref|XP_001366940.2| | 6.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4815.1_37986.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4815.1_37986.t1 atgaggaatcatatgaaaacgatactagctttacatctggtaatgttaaaccaagcatccattctctaatgtgtattgat ggtgatgcttttaagtcgagaattgaaacaaatgagaatatccaaactttaaacccagaaaagacagatgaaatagaatg tagagccaatcaaacagaatgtggaaccaaaaagacagaatatgatgccccaaaaagaaaatgtggagccaataagagaa aatttcgaacaaaaaagatatgtggagccaaaaagaggaaatgtgtacccaaaaaaatacattttgtagaatgtgcagtg gaaaagagagaatgtggatttgaaaagatagaatgtggagccaaaaacatagaatgtggattggagaagatagaatatgg agccaaaaacatagaatgtggatttgagaagatagaatatggaattgaagagacagaatgtgatgaagattcaggtcttc atacagccgaagagacagaatgtgatgaagattcaggtcttcatacatttcttgataactcatttgaagaagaatgtgag ttgattttaccaacatgttcaccagaccttcccatcagagataacattgaaggagaggcaggtgtcaaaccaactgcaca tctagaccaagtaaacgatattacacctaaatttgatggtaacgatgttaggatagggacagtgtatcagattcagtcaa tagaaaactctaaaattttagagactggtaagaataattctgaacccaagttgaagaaaacattgttgccaaaaataacc gaaagttgggagtttcaatgcaggatttgcttccatgttttctcatcaaagcatgcattaaaatgccataataaaattca cctaccaggttatcaaaaaccaaaagagaagtgtgagaagaagggtaaaaagtttaaatgtagtgagtgtgacagagaat tctcatctgaaggacgtctaaaacgtcatatagaattaaaaccccatgagccagtcaaatgtgattcttgtgatatcata tttccaaatagggagaaatacaaaatccacgtgaacaattgtcacctagaaaaggatgttacttatcagtgtgaagattg tggaaaggtatttaaaaagaaaggaaccctgcgaaaacatcaaaattttattcataaaaatattcatgcatatacctgca ctatttgcaatttacaattcaagtactgcaaatctttcaaggctcataccagaatatatcattcagccggggactctcca aaggtagtgtgtgatatctgtggaggacaatttacaaccgaccaaaatctacaacgtcatatgaaaatccataataatga catgaagtttgcttgtccgcattgtccaaaaacatttgtacagaaacatggtttgacgtgccacttaagaattcacacag gtagtaaaccgtacagctgtgatatctgtaaggaaggttttgcacataatgtcagtctaaagaaccatagaagaaaatac catatgaatgtcccagtcatttttccagagaaaaccgaagatttgtcatactag |
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Protein
| Protein ID | pfu_aug1.0_4815.1_37986.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4815.1_37986.t1 EESYENDTSFTSGNVKPSIHSLMCIDGDAFKSRIETNENIQTLNPEKTDEIECRANQTECGTKKTEYDAPKRKCGANKRK FRTKKICGAKKRKCVPKKIHFVECAVEKRECGFEKIECGAKNIECGLEKIEYGAKNIECGFEKIEYGIEETECDEDSGLH TAEETECDEDSGLHTFLDNSFEEECELILPTCSPDLPIRDNIEGEAGVKPTAHLDQVNDITPKFDGNDVRIGTVYQIQSI ENSKILETGKNNSEPKLKKTLLPKITESWEFQCRICFHVFSSKHALKCHNKIHLPGYQKPKEKCEKKGKKFKCSECDREF SSEGRLKRHIELKPHEPVKCDSCDIIFPNREKYKIHVNNCHLEKDVTYQCEDCGKVFKKKGTLRKHQNFIHKNIHAYTCT ICNLQFKYCKSFKAHTRIYHSAGDSPKVVCDICGGQFTTDQNLQRHMKIHNNDMKFACPHCPKTFVQKHGLTCHLRIHTG SKPYSCDICKEGFAHNVSLKNHRRKYHMNVPVIFPEKTEDLSY |
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