Gene
Gene Model ID | pfu_aug1.0_4828.1_59613 |
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Locus | scaffold4828.1 : 29179 ... 36035 : - |
To GenomeBrowser | scaffold4828.1:29179..36035 |
Genes list of scaffold | scaffold4828.1 |
Synonym | pfu_aug2.0_289.1_30570 |
Manual annotation
Study field | Environmental Response |
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Gene name | prostaglandin E2 receptor EP4 subtype-like |
Description | NCBI: BLASTN |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4828.1_59613.t1 | 1 | 1 | 7TM_GPCR_Srx | 36 | 286 | 2.5e-06 | 26.8 | 7.4e-10 | 3.6e-06 | 26.2 |
pfu_aug1.0_4828.1_59613.t1 | 1 | 1 | 7tm_1 | 45 | 311 | 1.3e-38 | 132.6 | 3.59994e-42 | 1.8e-38 | 132.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_4828.1_59613.t1 |
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Definition | - |
>pfu_aug1.0_4828.1_59613.t1 atgatgagagagcagacttttgtattaccgagtgtgtgtaacgctacccaggagaatggtactgatactgattccgccgc ctggggagccactgtaatatcacctatacttatgtccttggcgggcactgtggggaacattctggctctgatcgttctga gacgtacaaagaccaggggtgtcttctacactctggtggccggactggcatggactgaccttctgggaatactgctgacc tctccggccactatagccacatacgctaacggcaggcgatgggtaggtggccctgtgttctgtaaactgaacggatttct gatggtgtgtttcggcttggcaacaacgcttattgtgtgtgcaatggccgtggagagatttttgtcagtccgatgtgctt tcattcattcaaagcagtgtaacagagggagcgcacgcgtaacgctggtcattctgtggatttccgtaatgattttgggg atacttccgttgtttgggtttgggagattcactgttcagtacccttgtacgtggtgctttctagacttccacagtagaga tcctttgatggacgcttatgcgtatttatactctgtcattaacttgactgtgatagtagtgatgtcaatttgtaatgtct acgtcatggtgacgttgttgcacgtgcggtatcttaaacagcgcgcgggatcacaaagaggcaatatagagtttacgtac actacaggaaataagaagaaaaagaaacaaagaagcgtagaacttcagatgtttgtactgctttttgcgatcactatagt tttcactacatgctgggtgcctctgatgatacatatcctggtaacaataattagcggtgtgccgaaccattttgttgcct tggtaactgttaggctggcgagtatcaatcaaacacttgacccctggatgtacattctcctccggaagtccatcattaga aagatctgtcgttttgggaggagggtattctgtgttaaacaccaaagaacgggtgactctgacgaaatccaagacagaaa tttccatgcgcgccatttaaggtgctatcggaaacattgccacatgcccacgccacactttcatttacaagggcacataa ctccgtctggaagatgcgttgtgcaattcaagcgacggtcaaaatcaaaatcaaaatcaaaaagtacagacgaaaatcaa ggtaacaaactctcattgcctgacgttatgaaagatgcccattcaaagagtcctagcgcaattccggatgtggcagggct ttatgaaaatgacgagatctgcattcaatgtcagtcactacatgcatcacatgtttatcgtcaacaagccaacatggcgg caaccgaccttgaccaggaagctgcacaagaaaacgttgcaatggcacaggacaatgaaactacatctggtgatgaaagt gatacctcccaatcaaaaccttgtgaactgtgtacggccatggagcaaacaaagcctgtagaggacatgtcctcagatga ggatagtgacagtgatagtgaggaagacactgatgtattcctcactaagactactgatttatcgtcagaccaacttgggg cgttaccaaaaaccatgaataaagctaggcgtgggaaactgaaatctgaagtcaactttccccaatcttacttcagactt tcaggaaagacaaagcggagaacaaagtcgacgagttaa |
Protein
Protein ID | pfu_aug1.0_4828.1_59613.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4828.1_59613.t1 MMREQTFVLPSVCNATQENGTDTDSAAWGATVISPILMSLAGTVGNILALIVLRRTKTRGVFYTLVAGLAWTDLLGILLT SPATIATYANGRRWVGGPVFCKLNGFLMVCFGLATTLIVCAMAVERFLSVRCAFIHSKQCNRGSARVTLVILWISVMILG ILPLFGFGRFTVQYPCTWCFLDFHSRDPLMDAYAYLYSVINLTVIVVMSICNVYVMVTLLHVRYLKQRAGSQRGNIEFTY TTGNKKKKKQRSVELQMFVLLFAITIVFTTCWVPLMIHILVTIISGVPNHFVALVTVRLASINQTLDPWMYILLRKSIIR KICRFGRRVFCVKHQRTGDSDEIQDRNFHARHLRCYRKHCHMPTPHFHLQGHITPSGRCVVQFKRRSKSKSKSKSTDENQ GNKLSLPDVMKDAHSKSPSAIPDVAGLYENDEICIQCQSLHASHVYRQQANMAATDLDQEAAQENVAMAQDNETTSGDES DTSQSKPCELCTAMEQTKPVEDMSSDEDSDSDSEEDTDVFLTKTTDLSSDQLGALPKTMNKARRGKLKSEVNFPQSYFRL SGKTKRRTKSTS |