Gene
| Gene Model ID | pfu_aug1.0_4828.1_59613 |
|---|---|
| Locus | scaffold4828.1 : 29179 ... 36035 : - |
| To GenomeBrowser | scaffold4828.1:29179..36035 |
| Genes list of scaffold | scaffold4828.1 |
| Synonym | pfu_aug2.0_289.1_30570 |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | prostaglandin E2 receptor EP4 subtype-like |
| Description | NCBI: BLASTN |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4828.1_59613.t1 | 1 | 1 | 7TM_GPCR_Srx | 36 | 286 | 2.5e-06 | 26.8 | 7.4e-10 | 3.6e-06 | 26.2 |
| pfu_aug1.0_4828.1_59613.t1 | 1 | 1 | 7tm_1 | 45 | 311 | 1.3e-38 | 132.6 | 3.59994e-42 | 1.8e-38 | 132.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4828.1_59613.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4828.1_59613.t1 atgatgagagagcagacttttgtattaccgagtgtgtgtaacgctacccaggagaatggtactgatactgattccgccgc ctggggagccactgtaatatcacctatacttatgtccttggcgggcactgtggggaacattctggctctgatcgttctga gacgtacaaagaccaggggtgtcttctacactctggtggccggactggcatggactgaccttctgggaatactgctgacc tctccggccactatagccacatacgctaacggcaggcgatgggtaggtggccctgtgttctgtaaactgaacggatttct gatggtgtgtttcggcttggcaacaacgcttattgtgtgtgcaatggccgtggagagatttttgtcagtccgatgtgctt tcattcattcaaagcagtgtaacagagggagcgcacgcgtaacgctggtcattctgtggatttccgtaatgattttgggg atacttccgttgtttgggtttgggagattcactgttcagtacccttgtacgtggtgctttctagacttccacagtagaga tcctttgatggacgcttatgcgtatttatactctgtcattaacttgactgtgatagtagtgatgtcaatttgtaatgtct acgtcatggtgacgttgttgcacgtgcggtatcttaaacagcgcgcgggatcacaaagaggcaatatagagtttacgtac actacaggaaataagaagaaaaagaaacaaagaagcgtagaacttcagatgtttgtactgctttttgcgatcactatagt tttcactacatgctgggtgcctctgatgatacatatcctggtaacaataattagcggtgtgccgaaccattttgttgcct tggtaactgttaggctggcgagtatcaatcaaacacttgacccctggatgtacattctcctccggaagtccatcattaga aagatctgtcgttttgggaggagggtattctgtgttaaacaccaaagaacgggtgactctgacgaaatccaagacagaaa tttccatgcgcgccatttaaggtgctatcggaaacattgccacatgcccacgccacactttcatttacaagggcacataa ctccgtctggaagatgcgttgtgcaattcaagcgacggtcaaaatcaaaatcaaaatcaaaaagtacagacgaaaatcaa ggtaacaaactctcattgcctgacgttatgaaagatgcccattcaaagagtcctagcgcaattccggatgtggcagggct ttatgaaaatgacgagatctgcattcaatgtcagtcactacatgcatcacatgtttatcgtcaacaagccaacatggcgg caaccgaccttgaccaggaagctgcacaagaaaacgttgcaatggcacaggacaatgaaactacatctggtgatgaaagt gatacctcccaatcaaaaccttgtgaactgtgtacggccatggagcaaacaaagcctgtagaggacatgtcctcagatga ggatagtgacagtgatagtgaggaagacactgatgtattcctcactaagactactgatttatcgtcagaccaacttgggg cgttaccaaaaaccatgaataaagctaggcgtgggaaactgaaatctgaagtcaactttccccaatcttacttcagactt tcaggaaagacaaagcggagaacaaagtcgacgagttaa |
|
Protein
| Protein ID | pfu_aug1.0_4828.1_59613.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4828.1_59613.t1 MMREQTFVLPSVCNATQENGTDTDSAAWGATVISPILMSLAGTVGNILALIVLRRTKTRGVFYTLVAGLAWTDLLGILLT SPATIATYANGRRWVGGPVFCKLNGFLMVCFGLATTLIVCAMAVERFLSVRCAFIHSKQCNRGSARVTLVILWISVMILG ILPLFGFGRFTVQYPCTWCFLDFHSRDPLMDAYAYLYSVINLTVIVVMSICNVYVMVTLLHVRYLKQRAGSQRGNIEFTY TTGNKKKKKQRSVELQMFVLLFAITIVFTTCWVPLMIHILVTIISGVPNHFVALVTVRLASINQTLDPWMYILLRKSIIR KICRFGRRVFCVKHQRTGDSDEIQDRNFHARHLRCYRKHCHMPTPHFHLQGHITPSGRCVVQFKRRSKSKSKSKSTDENQ GNKLSLPDVMKDAHSKSPSAIPDVAGLYENDEICIQCQSLHASHVYRQQANMAATDLDQEAAQENVAMAQDNETTSGDES DTSQSKPCELCTAMEQTKPVEDMSSDEDSDSDSEEDTDVFLTKTTDLSSDQLGALPKTMNKARRGKLKSEVNFPQSYFRL SGKTKRRTKSTS |
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