Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4831.1_59614
Locus scaffold4831.1 : 3896 ... 17022 : +
To GenomeBrowser scaffold4831.1:3896..17022
Genes list of scaffold scaffold4831.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4831.1_59614.t1 1 1 MFS_1 128 255 2.7e-08 32.9 1.3e-11 3.7e-08 32.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4831.1_59614.t1 gi|242020577|ref|XP_002430729.1| monocarboxylate transporter, putative [Pediculus humanus corporis] 9.0e-35

Transcript
Transcript IDpfu_aug1.0_4831.1_59614.t1
Definition-
>pfu_aug1.0_4831.1_59614.t1
atgctgtctaaccctgcgcaccattcggggatcgagaataagagatcgctttccgaacgtaaacaagttagtagaaagtg
cagcaacgagagtagtaaaaatattagttacgatggaaacagcagttttagaattattccaggaaatgggtcaagttcta
tccaggattctgggtcgtctgctcgagaaaacaacaacggaatacctgtgacaatgaagactccgcagctccgtaaggag
gcgactcctgtgtgtgatggtgccgaccaaaaaactatgacacgaatagattttggggatcattttcccgaggggggttg
gggatgggtggtggtggcagccgctaccctcgtacatatgctgtgtaacggttttcacttcgcttttggtactctttact
tgtgtattctagacagaaaagacatctccgctgactctatccatgcagtatggcttggtactgtgggactcagcatcaca
ttgttcctttccccggtgatatctaccatatgtcaacgaaaaagtccgaggttgtatgctgtaattggaggcctgatatg
ctcgcttggatgccttttcctgtcattttcgcataaaatcgaacaactttttatcagtcattgtgtggtgatgtcaattg
gaagtggaattactctcaataccgcaagcataattgttggtagatacttccggcggaagcgagaactggcggaaatgatc
atgacttccggtactggcatcggtgcggctctgatggctgttcttcttcgagaactttttggaaccacagaagggatttt
aatgaagcttggtaggaatgaagtactgaaagtcccctaccagtgttgttgttcctcgtcaacggatggcacagtcataa
gcaaaagtaggtcctttgacaaacatcttcttccgaaccgaagtacatatcgacaaaccgaaagcgtcaggatgtcttga

Protein
Protein IDpfu_aug1.0_4831.1_59614.t1
Definition-
>pfu_aug1.0_4831.1_59614.t1
MLSNPAHHSGIENKRSLSERKQVSRKCSNESSKNISYDGNSSFRIIPGNGSSSIQDSGSSARENNNGIPVTMKTPQLRKE
ATPVCDGADQKTMTRIDFGDHFPEGGWGWVVVAAATLVHMLCNGFHFAFGTLYLCILDRKDISADSIHAVWLGTVGLSIT
LFLSPVISTICQRKSPRLYAVIGGLICSLGCLFLSFSHKIEQLFISHCVVMSIGSGITLNTASIIVGRYFRRKRELAEMI
MTSGTGIGAALMAVLLRELFGTTEGILMKLGRNEVLKVPYQCCCSSSTDGTVISKSRSFDKHLLPNRSTYRQTESVRMS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495