Gene
| Gene Model ID | pfu_aug1.0_4831.1_59618 |
|---|---|
| Locus | scaffold4831.1 : 37158 ... 53925 : - |
| To GenomeBrowser | scaffold4831.1:37158..53925 |
| Genes list of scaffold | scaffold4831.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4831.1_59618.t1 | 1 | 1 | SET | 68 | 278 | 1.5e-10 | 41.6 | 1.1e-13 | 8.5e-10 | 39.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4831.1_59618.t1 | gi|296232125|ref|XP_002761462.1| | PREDICTED: SET domain-containing protein 4 [Callithrix jacchus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4831.1_59618.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4831.1_59618.t1 atgactggatacagttcattctccaaatccagttgtggaagaacacgtagaattcgcaaacgtcgtccacgtcttgtaaa attacaacctgttctcacagcatcagcagctgtccacatatcacttgcccaatggatgaaatcaaatacccatgatttta gatggaaatgtaaacttactccagcagacttcaaaggtgttgggagaggactacagacaagagagaatctgaatactttg gacctgatagtttctgttccagaaaatcttctcattactgttaaaacggctttacagagtaatgtggtagaatttttaca aagatctaatactagcttgacacaacaagaaattctttcagttttcatcatcgtggaaaaagagaagaaagagcagtcct tttggatgccttatatacagaccttacctggtaccttcactactccggcatattacagtgataaagaaatgcttttatta cctgcacaactcaggaagaaggcagagaagaaaataactgagcttcagcaaacttatgctcgtcttaaatccttacttga tttatattggacagaattgggtttggtgtttagttttaacaatttctgctgggcctggtattgtgtgaattcaagatctg tttatttcaagacagaaacatttgattgtgttagagacgacggaaatcacgttgctttagctccttttttagatttactg aatcattcatgtaaagctaagattgaagctggatttaatacaaagacaaaatgttatgaaataaggacgttagataaata cagaaaatatgagcaggtgtttatatcatatgggccacatgataatcatcatctgttaatagaatatgggttcacattgc cagataactcatatgatacatatgaattggattttgatgattcaatggagaccctatcatccatgtctgttacaaattta gagcaaaaaaagaaaattttacaaggcaataatcttaggaaaacctggagacatgctctgaaaggagaggaaatatcaac atgtaatacagatagagcaaagaaagtcgccagacaattgctgtccaaatgtttacaggacaaccgtactgtgatgaaaa agtttcctgagtgtttatcagaacatgagaggattatttatactgtagtagaatctgagcacaagatacttaagaaagca tggaccgaggtctcgtag |
|
Protein
| Protein ID | pfu_aug1.0_4831.1_59618.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4831.1_59618.t1 MTGYSSFSKSSCGRTRRIRKRRPRLVKLQPVLTASAAVHISLAQWMKSNTHDFRWKCKLTPADFKGVGRGLQTRENLNTL DLIVSVPENLLITVKTALQSNVVEFLQRSNTSLTQQEILSVFIIVEKEKKEQSFWMPYIQTLPGTFTTPAYYSDKEMLLL PAQLRKKAEKKITELQQTYARLKSLLDLYWTELGLVFSFNNFCWAWYCVNSRSVYFKTETFDCVRDDGNHVALAPFLDLL NHSCKAKIEAGFNTKTKCYEIRTLDKYRKYEQVFISYGPHDNHHLLIEYGFTLPDNSYDTYELDFDDSMETLSSMSVTNL EQKKKILQGNNLRKTWRHALKGEEISTCNTDRAKKVARQLLSKCLQDNRTVMKKFPECLSEHERIIYTVVESEHKILKKA WTEVS |
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