Gene
| Gene Model ID | pfu_aug1.0_4831.1_59619 |
|---|---|
| Locus | scaffold4831.1 : 54126 ... 72358 : + |
| To GenomeBrowser | scaffold4831.1:54126..72358 |
| Genes list of scaffold | scaffold4831.1 |
| Synonym | pfu_aug2.0_10811.1_06447 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4831.1_59619.t1 | 2 | 1 | HATPase_c_3 | 29 | 134 | 3.2e-17 | 62.4 | 2.4e-20 | 9.1e-17 | 61.0 |
| pfu_aug1.0_4831.1_59619.t1 | 1 | 1 | zf-CW | 208 | 253 | 2.7e-17 | 62.2 | 1.4e-20 | 5.3e-17 | 61.2 |
| pfu_aug1.0_4831.1_59619.t1 | 2 | 2 | HATPase_c_3 | 271 | 293 | 3.2e-17 | 62.4 | 0.61 | 2300.0 | -1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4831.1_59619.t1 | gi|291233057|ref|XP_002736471.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4831.1_59619.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4831.1_59619.t1 atggcgttccataggggcatacagacaagtaaagtcagcccgtcgtatttgcatagcaattccacaagccacacttgggc ttttagcgccatcgcagaattgattgacaatgcatatgatcctgatgttaatgcatctgagctgtggatcgacaagagag atatcaataacataaggtgtctgacattccttgataatggcaatgggatgaatccggataaactccataagatgttgagc tttggatactgtgaaaaagtatcagttggtaaccacgttcccataggacattatggaaatggatttaagtcaggctccat gaggctcgggaaagatgctatagttttcacacgccaggcacacacaatgagtgtaggactgctatctcagacgtacctca ccaacataaaggcagaaacagtacttgttcccattgtaacatggtcgctgcccaacaagcatagatcaaacaacatagac acaactaataacctgaaggccattacatcacattccatattccgtgatgagaaggaccttctatatgaactagaggctat ggagaagctaggaaccggcacaaaaattattgtttatagtatgaccagtgaggatgactggacgtgggcacagtgtgata actgtttgaagtggcgacgtctgccattagggttccgctctgaagacctaccagacaagtggttctgtcatatgaatcct gtagcacagtttaatcgatgtgatattgatgaggaaccagaggatgaagatgaagctttacaagcaccaacgtacaaaaa gacgtacaagaagagagaaaatgaaaggaagttacagataaaacttcaggagaagcagaaatcacaagctagagaaatgg ctctcatcgccaaagaaaactttctacgtaggaaggaaatggatctgaacaagagaaattcagtg |
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Protein
| Protein ID | pfu_aug1.0_4831.1_59619.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4831.1_59619.t1 MAFHRGIQTSKVSPSYLHSNSTSHTWAFSAIAELIDNAYDPDVNASELWIDKRDINNIRCLTFLDNGNGMNPDKLHKMLS FGYCEKVSVGNHVPIGHYGNGFKSGSMRLGKDAIVFTRQAHTMSVGLLSQTYLTNIKAETVLVPIVTWSLPNKHRSNNID TTNNLKAITSHSIFRDEKDLLYELEAMEKLGTGTKIIVYSMTSEDDWTWAQCDNCLKWRRLPLGFRSEDLPDKWFCHMNP VAQFNRCDIDEEPEDEDEALQAPTYKKTYKKRENERKLQIKLQEKQKSQAREMALIAKENFLRRKEMDLNKRNSV |
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