Gene
| Gene Model ID | pfu_aug1.0_4846.1_01831 |
|---|---|
| Locus | scaffold4846.1 : 21276 ... 26437 : + |
| To GenomeBrowser | scaffold4846.1:21276..26437 |
| Genes list of scaffold | scaffold4846.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4846.1_01831.t1 | 2 | 1 | Neur_chan_memb | 4 | 18 | 7.9e-14 | 52.1 | 0.37 | 2700.0 | -2.1 |
| pfu_aug1.0_4846.1_01831.t1 | 1 | 1 | Neur_chan_LBD | 27 | 218 | 5.6e-38 | 130.2 | 9.99967e-42 | 7.4e-38 | 129.8 |
| pfu_aug1.0_4846.1_01831.t1 | 2 | 2 | Neur_chan_memb | 239 | 333 | 7.9e-14 | 52.1 | 1.1e-17 | 7.9e-14 | 52.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4846.1_01831.t1 | gi|17537185|ref|NP_496959.1| | EAT-2 [Caenorhabditis elegans] | 2.0e-33 |
Transcript
| Transcript ID | pfu_aug1.0_4846.1_01831.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4846.1_01831.t1 atgaggtgcaatcgctacagtttgtttgtatttgtgcagatttttgtttgcgcatcgtgtactacagtggacgaaataga cagactgtccgggactttactgaccggctacaacaagtatactagaccaccattcgacaacaaggaaacgctatatgtct atgtaacattcggactcatatctataaattactatgatgacgtcactggcaccttatccattgttggaggaccctctttt acctggaacgactaccgactcggatggaatcctgcagattactctaatattacaactttgattctacctagaactgttat ctggtaccccgaaatctacgtcattaatccagctggaaaaatggatgcctttgctaaaggacagcctctggtcgctcgta tttacccaaatggtgatgtgatcctcacctctggcgatcagataaatgtgatttgccccagcgatatggaatactttccc tttgaccgacaaacgtgcagaatacgtcttgcaatatggaattacgcagcaaatgaagtttttcttaaaagtttacacca cgaagcagacatagaatactatagcaagaacaatctttgggatttagaatccactagttgcaaagacttatctatgggta atttcgatggcttgtttgtagccgaaatgacgatgaagcgcaagtctttgttcctctgcataagcatgtttgccccattt atggtcttagcactcctaaaccctttggtgtttattttaccacaggagagcggagaaagaatttcatttgcagtaacgat tctactgtcttttatggtatttatgaccttgttgacagaagctcttccgagatcatccacaccggtggccagcgtgtctt actaccttctcaccttcattctctacagttcctgtataattactaccgtgataattacctccaaagtatactggcttgat aatacagatgaccaaatcaggaaatatgaacgcattgcaaatattttgagtctgtctgttctccgcagctgttcacaatg caagaagaaaggatgtgtggctaaatccgctgtgcacgagtcttctatgaatgagaaaagtatcatttatagacgaaatc cacatgatttagctcaacgacttgacaacatagcgttcacatactcaatgttattccttctgattgtgttcatcgcattt ttaattcagatgaatacctga |
|
Protein
| Protein ID | pfu_aug1.0_4846.1_01831.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4846.1_01831.t1 MRCNRYSLFVFVQIFVCASCTTVDEIDRLSGTLLTGYNKYTRPPFDNKETLYVYVTFGLISINYYDDVTGTLSIVGGPSF TWNDYRLGWNPADYSNITTLILPRTVIWYPEIYVINPAGKMDAFAKGQPLVARIYPNGDVILTSGDQINVICPSDMEYFP FDRQTCRIRLAIWNYAANEVFLKSLHHEADIEYYSKNNLWDLESTSCKDLSMGNFDGLFVAEMTMKRKSLFLCISMFAPF MVLALLNPLVFILPQESGERISFAVTILLSFMVFMTLLTEALPRSSTPVASVSYYLLTFILYSSCIITTVIITSKVYWLD NTDDQIRKYERIANILSLSVLRSCSQCKKKGCVAKSAVHESSMNEKSIIYRRNPHDLAQRLDNIAFTYSMLFLLIVFIAF LIQMNT |
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