Gene
| Gene Model ID | pfu_aug1.0_4846.1_01832 |
|---|---|
| Locus | scaffold4846.1 : 34141 ... 36055 : - |
| To GenomeBrowser | scaffold4846.1:34141..36055 |
| Genes list of scaffold | scaffold4846.1 |
| Synonym | pfu_aug2.0_3831.1_05904 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4846.1_01832.t1 | 1 | 1 | Neur_chan_LBD | 2 | 91 | 7.7e-16 | 57.9 | 2.2e-19 | 1.1e-15 | 57.3 |
| pfu_aug1.0_4846.1_01832.t1 | 1 | 1 | Neur_chan_memb | 100 | 192 | 1.9e-10 | 41.0 | 5.6e-14 | 2.8e-10 | 40.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4846.1_01832.t1 | gi|156398421|ref|XP_001638187.1| | predicted protein [Nematostella vectensis] | 3.0e-22 |
Transcript
| Transcript ID | pfu_aug1.0_4846.1_01832.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4846.1_01832.t1 atggtatggatgttactaagtgaccaaatcaaatacctgtgtaaaagtgacatgagctatttcccgtttgatagacaaga atgcaaacttgttttagggtcgtggaattactatactcaggatatctatttggtgaggaacagtacgatggcagatttaa ggtactactttaccaataacatatggactcttgagacgacatctatagatcagtataaggaaggagattatgaaggtttc cttcagatcacgttacatttgagaagaaagccgctgtatttttgcatcaatatgttggcaccaatgatggcacttgcgtt gctcaacaccatggtattcctgattcctgctcactgtggagaaagaatttcctactctgtaactatcttcctcagtttcg tggttttcatgacactgatgtcagactatttaccaaagtcatcaacaaatttgtcctatttttcctacttctcacttatc cttatattctacagcgcaatcatcactattgaatcaaccctcatcatgcgacttcactatcggaatcaagacgagcctgt ttcctcaactgtaaaatgtttatataatgtacttagtttaaaagtatggaaagtgtgtctggggaggggaaagacaaaag tttgcgcagagaaatgtcatgaagatggcatttcttgtaagagtacagaattcccaaagaaaactttgacttatggagaa atcgccctaaagtttgatgccgttgcatttacatattctgtactttttgtcatctcgatttcattggcttatctattttt agtgtttgcatcataa |
|
Protein
| Protein ID | pfu_aug1.0_4846.1_01832.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4846.1_01832.t1 MVWMLLSDQIKYLCKSDMSYFPFDRQECKLVLGSWNYYTQDIYLVRNSTMADLRYYFTNNIWTLETTSIDQYKEGDYEGF LQITLHLRRKPLYFCINMLAPMMALALLNTMVFLIPAHCGERISYSVTIFLSFVVFMTLMSDYLPKSSTNLSYFSYFSLI LIFYSAIITIESTLIMRLHYRNQDEPVSSTVKCLYNVLSLKVWKVCLGRGKTKVCAEKCHEDGISCKSTEFPKKTLTYGE IALKFDAVAFTYSVLFVISISLAYLFLVFAS |
|