Gene
| Gene Model ID | pfu_aug1.0_486.1_65483 |
|---|---|
| Locus | scaffold486.1 : 33476 ... 49085 : + |
| To GenomeBrowser | scaffold486.1:33476..49085 |
| Genes list of scaffold | scaffold486.1 |
| Synonym | pfu_aug2.0_325.1_17301 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_486.1_65483.t1 | 1 | 1 | Sec7 | 475 | 628 | 4.2039e-45 | 153.6 | 0.0 | 9.80909e-45 | 152.4 |
| pfu_aug1.0_486.1_65483.t1 | 1 | 1 | PH_9 | 676 | 771 | 2.1e-36 | 124.6 | 1.7e-39 | 6.4e-36 | 123.1 |
| pfu_aug1.0_486.1_65483.t1 | 1 | 1 | PH | 677 | 771 | 1.3e-07 | 31.7 | 3.6e-11 | 1.3e-07 | 31.7 |
Transcript
| Transcript ID | pfu_aug1.0_486.1_65483.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_486.1_65483.t1 atggtagaccgggctgcaagcagtccttcccgtatacctatccctcgtaagagtcccattgtcaaacagaaaaatggagc tgtacaaaaggatggaaatggttctgatctgataaatgcaagtcctaatgccagctttgaaaatggcattgtaggtagtg aattgtatggtagttgtggtagtacaggaaatagtgctacaatggtgaacgacaatgaagtcaaaagtcagcctgaagca aagggatttgaaacgtttctaatgacaggagatatgatgattcgtactacctctgccccaaaatctcgaaatgcctccac acgtaacccatctgacagcacggacaccagtgatacaaacatggacgatcatagcagtagttacccaagctctcccagca ttgctgtcggagagaaatctcacgatagagaattttctgatagtgtccccatgatgaaatccaatcagatgtcatccgag tcaggatttgaggatcagggtcaaatgtctgacacagggacactggaacgtgataaacaaaaagataggctaaatgatcc aagcagtatatcagacctgtctatgacaagcactgaggatgtgtctgaaatgataaaatctcaatcgtctgccgtgtctt caacttccacagcctctgatatgaggtctgatatatcggaacaaacagttatacatcagaacatcgggagtgaatgctcc actgacagtagttcaggggtcatttcaccagaagtttcgaacggtgatctaacatgtactgtggaagaaaaagaggtcac tgatgtaagcaatcagaaaacaaaaatagtgactagtaaaagtgcggaaaaaattattcttacaaaagctagtgcatctt cccatcagactgttcggtccagcaaaagtcaagaattacaggtcggtgctgaattttctatggtgaatattgatattgat gataattatgcctattcgttggaccaaatccctcagcaagggacaaatgattccccagattctctaaatgaacaaattgc agcttccaagagtctggatagctcaccagagcattcaaaaacagagagagtgaatgataaggagtttattcctggtttta tcagttttgatgattctcattctaggaaattgaaaaccaaagaacaatatgaaaatggtgcttatatgactaataatgat gtaaatgatattgacgaaaagacagagtttgctagtgttgaaccttcgagtgccaaaacatttcatactcgcaaacctga atactatgatagggaaattcctttacctcaagcctctccagaagcagatactgaaattgtacatagatctgatcgtgatt cctttgatccatcggtggatcccaatctactagattaccaaccacctataaagagtgtagaccaaccatcagccttccga ctcgctaaaagactctataatctggaaggatttaaaaagtcagatgttgcacgccatctgtataaaaagaacgactttaa ttccattgtggcagaagaatacctcagattttttgactttgttggtgatacattggacctggctttgaggaagttcctta agcagttctcacttctaggagagacacaggagagggaaagagttttagcgtacttttcatctcgattcttattctgtaat ccaggatccttcaactctgaagatgcctgtcataccttaacatgtgcaataatgctgctgaacactgatctccatggccc tactgtgggccgtcgaatgacttgtgctgaatttatagagaatcttgctgaattgaacgatggtgaaaactttcctaaag atgtactcaaatgtatatatcaagccatcaagtcggagcctctagaatgggcagttgatgacagtgaagatgagcagaca agtacagatgaccgcacccctcaatccccaccccctgtgccacagcctatgattgcttcacacaatccattccttgatgt accagatccatcaaaaaccacggaatacaagtctggttatgtgatgaggaagtgttgtatggagcccgacaatagaaaaa ctccaattggaaagcgaggatggaagatgttttatgccaccctctgtgatatgatgctgtatttgtacaaggatcaacat agtatgaagaaaggacacctagcggaaagcacccagaatgcaattcgtatccatcattgcctagcaacaaaggcctcaga ttacaagaaaaagcaacatgttttcagacttcaaacagcagactgggcagagtacttattccaaacgagatcaagagtcg tgtacttgtatgcaatatatgagtcagtcatgccaagttcatatctcatgggtcagatggagaagtttctgccattttca ctattctaa |
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Protein
| Protein ID | pfu_aug1.0_486.1_65483.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_486.1_65483.t1 MVDRAASSPSRIPIPRKSPIVKQKNGAVQKDGNGSDLINASPNASFENGIVGSELYGSCGSTGNSATMVNDNEVKSQPEA KGFETFLMTGDMMIRTTSAPKSRNASTRNPSDSTDTSDTNMDDHSSSYPSSPSIAVGEKSHDREFSDSVPMMKSNQMSSE SGFEDQGQMSDTGTLERDKQKDRLNDPSSISDLSMTSTEDVSEMIKSQSSAVSSTSTASDMRSDISEQTVIHQNIGSECS TDSSSGVISPEVSNGDLTCTVEEKEVTDVSNQKTKIVTSKSAEKIILTKASASSHQTVRSSKSQELQVGAEFSMVNIDID DNYAYSLDQIPQQGTNDSPDSLNEQIAASKSLDSSPEHSKTERVNDKEFIPGFISFDDSHSRKLKTKEQYENGAYMTNND VNDIDEKTEFASVEPSSAKTFHTRKPEYYDREIPLPQASPEADTEIVHRSDRDSFDPSVDPNLLDYQPPIKSVDQPSAFR LAKRLYNLEGFKKSDVARHLYKKNDFNSIVAEEYLRFFDFVGDTLDLALRKFLKQFSLLGETQERERVLAYFSSRFLFCN PGSFNSEDACHTLTCAIMLLNTDLHGPTVGRRMTCAEFIENLAELNDGENFPKDVLKCIYQAIKSEPLEWAVDDSEDEQT STDDRTPQSPPPVPQPMIASHNPFLDVPDPSKTTEYKSGYVMRKCCMEPDNRKTPIGKRGWKMFYATLCDMMLYLYKDQH SMKKGHLAESTQNAIRIHHCLATKASDYKKKQHVFRLQTADWAEYLFQTRSRVVYLYAIYESVMPSSYLMGQMEKFLPFS LF |
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