Gene
| Gene Model ID | pfu_aug1.0_486.1_65484 |
|---|---|
| Locus | scaffold486.1 : 55868 ... 78159 : - |
| To GenomeBrowser | scaffold486.1:55868..78159 |
| Genes list of scaffold | scaffold486.1 |
| Synonym | pfu_aug2.0_325.1_17299 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_486.1_65484.t1 | 6 | 1 | WD40 | 41 | 49 | 2.5e-13 | 49.3 | 0.016 | 240.0 | 1.8 |
| pfu_aug1.0_486.1_65484.t1 | 6 | 2 | WD40 | 60 | 90 | 2.5e-13 | 49.3 | 3.3e-06 | 0.049 | 13.5 |
| pfu_aug1.0_486.1_65484.t1 | 6 | 3 | WD40 | 126 | 149 | 2.5e-13 | 49.3 | 0.093 | 1400.0 | -0.6 |
| pfu_aug1.0_486.1_65484.t1 | 6 | 4 | WD40 | 166 | 188 | 2.5e-13 | 49.3 | 0.0013 | 20.0 | 5.2 |
| pfu_aug1.0_486.1_65484.t1 | 6 | 5 | WD40 | 255 | 285 | 2.5e-13 | 49.3 | 6.6e-09 | 9.8e-05 | 22.0 |
| pfu_aug1.0_486.1_65484.t1 | 6 | 6 | WD40 | 301 | 347 | 2.5e-13 | 49.3 | 2.6e-05 | 0.39 | 10.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_486.1_65484.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_486.1_65484.t1 aaaatgatatagagtcacttccatcatcgtctgtgagattggatttacctggtgtaggaaagagaagtgttccagccccc atgcatgttcctgaacctaatctctatcacacaggtgactatcgtgacaactctatcgttgtgtggagcacctataacta ccaagtactgaccacctacaaaactaccgcccctgttcatgacttagcctgggacccatacactgttaacgagttcgcct ctgtgggacaggacggcacggtgttattctggttactagatgaaaccacaaccgatgtctgtttgaatgtacatgaagcg gaggtaccgcaggaattgttacaaagtcaaatcatgggtaacagccatgtagatttcacatccttggaatatgcagggga cagcactctatttatatctacaaacaatggtaaaatgtcagtatgggatacaagacataactcttgcttcatgcactggg aagctgacacttctgaaataggtgttgtactgtgtaagagagacagactgctgactggtagccagggtaaaaatcttcgt atctgggccatcagctccgtaggcagtatgaaagccccaggagataatggcagaaacggaggaatcaccatggaagacga gatgaacctggatggtgcaataactacagcagcttttgacgagagtcttgaaatgggcatcgttgggacatcagcaggaa ctatatggtatatcaactggccagaacgtaccagtatcagacttgtatcaagtcatgtacacaaggttaatggactggca tgtattaatggttatatagcttcctgtgccgatgatggcagtcttaggttatggtccatagaaaatcgtgaacaagtgct gcagttccaggttctagatcagacctgcacatgtgttgcatttagtcctcaaaaatctcgaccagacccaaattatcaga gtcaagatcctgattctgctgaagaaaagatactgtctaatgtcactgctggttacagtgacggaacgatacgcatgttt gaccgtaaaactcatcttcggataccctcggtcttgtgcttttctttagaattcaaaagaagagcacaagaccgtgaggt atccgacgatgcgtaa |
|
Protein
| Protein ID | pfu_aug1.0_486.1_65484.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_486.1_65484.t1 NDIESLPSSSVRLDLPGVGKRSVPAPMHVPEPNLYHTGDYRDNSIVVWSTYNYQVLTTYKTTAPVHDLAWDPYTVNEFAS VGQDGTVLFWLLDETTTDVCLNVHEAEVPQELLQSQIMGNSHVDFTSLEYAGDSTLFISTNNGKMSVWDTRHNSCFMHWE ADTSEIGVVLCKRDRLLTGSQGKNLRIWAISSVGSMKAPGDNGRNGGITMEDEMNLDGAITTAAFDESLEMGIVGTSAGT IWYINWPERTSIRLVSSHVHKVNGLACINGYIASCADDGSLRLWSIENREQVLQFQVLDQTCTCVAFSPQKSRPDPNYQS QDPDSAEEKILSNVTAGYSDGTIRMFDRKTHLRIPSVLCFSLEFKRRAQDREVSDDA |
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