Gene
| Gene Model ID | pfu_aug1.0_4860.1_45061 |
|---|---|
| Locus | scaffold4860.1 : 38006 ... 53223 : + |
| To GenomeBrowser | scaffold4860.1:38006..53223 |
| Genes list of scaffold | scaffold4860.1 |
| Synonym | pfu_aug2.0_529.1_30862 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4860.1_45061.t1 | 2 | 1 | G6PD_C | 58 | 214 | 1.82169e-44 | 151.7 | 3.60134e-43 | 2.7e-39 | 134.7 |
| pfu_aug1.0_4860.1_45061.t1 | 2 | 2 | G6PD_C | 285 | 327 | 1.82169e-44 | 151.7 | 1.2e-06 | 0.0088 | 14.9 |
| pfu_aug1.0_4860.1_45061.t1 | 1 | 1 | Glucosamine_iso | 388 | 580 | 0.0 | 160.3 | 0.0 | 0.0 | 159.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4860.1_45061.t1 | gi|348521714|ref|XP_003448371.1| | PREDICTED: GDH/6PGL endoplasmic bifunctional protein-like isoform X1 [Oreochromis niloticus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4860.1_45061.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4860.1_45061.t1 atggtgctcgtgcttgattgttgtgattatgacgtcatcttttcaagcactggaatcctcaaagtcattgctgccattat ttatcaaaagaaaggaatcatgcgcttcaaacagggccgcagtctagcgcagtctcaccatcgacaagttattgtgctga aaaacaaagatgctttggaaccaattctgaattctgaccatgttgacagagtagaacttgttatgaaagaaaactttgga gttaaaggtcgttttgaatactacaatcaatatggagttatccgtgatgtcatgcagaatcatctgacagagttacttgc ccttgttgccatgaatctcccatctaccttatctaccagagaaatagaaagtcagagaatgagtatcctaaaccatgtgc aacctttgacctctaggcacacactgattggtcagtattcaaaatacattagtgaagcacaagaagagggcgtcaacgca tcatcatcggccatgacacctacgtttggagcagctgtcatgtatgttgacaatgcacgttggagaaatgttcctttctt agtgatatctggaaaacaactggatgaaaagtcaagttatattcgcattgttttcaaggacaaggaattttgtgtttctt cgtgcacacatttgaatggaagtcattttcatggtcctaagcaaattattttccacataggccatggtagcttgccttca ccaggaattcttgtctccaaaaatttgttcaagcttaagttgccaccaggattatctactattgtagtaacatcgcacga ttcctcagtgtatgggctgagcatggatgattataatgttgctgtgccggttgaaaacaacgatgcatatgttacggtca tagaagacttgtaccttggacatcagcagagctttgtcagtactggtaggcttatgacactatgggagatatggacccct gttctttcaggaaaacactcacccaaaatgtacatggaaaatactgatttttcactcaattttcaactgaacaatggagg tattgaattcacagataaatacatggcatttgttgagagcccgtcagaggctagggatcaaatgcgtagtttaccaccaa ggtttttaggacataaactcgttgtaggatcttctgatgaattataccaacaagtagccgaggaaatttatatcaaagct ttatcttcagtaacagataaaaagtcttttcatatagcattttcaggtggaacaacgcctatcccgttgtaccgagctct tgtcactttctttcctaattttccatggacacggacccacatctggcaggtggacgaacgatgtgttctacctacaaact ctaaatctaatttcaaagttatggaaacagaacttttacagaaaatcaacattccataccataatgtacattccatgcca gttttcttagctggtgaaatttgctcaggaagaggtgtgaagttataccgtgatgatttaacatttcatttgataaataa ttcatttgatctcgtagttttaggtgtgggaagcgatggccacacggcatcattatttccaaggtcatctttactagatg acagtgattcattagtgaccttgacctctgatgaggcatcaccaaggcgattgacattgtcatacaaaataataaataaa tcaaaatttgtgatagcaatagtgactggcaagtcaaagcatgacattgtagaaaaactgagtgaggagacaaaatctaa atatgattatccaatattaggtgtaaatccaactctaggaaatatgacattttttattgataatgatgcatggtttggtg aataa |
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Protein
| Protein ID | pfu_aug1.0_4860.1_45061.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4860.1_45061.t1 MVLVLDCCDYDVIFSSTGILKVIAAIIYQKKGIMRFKQGRSLAQSHHRQVIVLKNKDALEPILNSDHVDRVELVMKENFG VKGRFEYYNQYGVIRDVMQNHLTELLALVAMNLPSTLSTREIESQRMSILNHVQPLTSRHTLIGQYSKYISEAQEEGVNA SSSAMTPTFGAAVMYVDNARWRNVPFLVISGKQLDEKSSYIRIVFKDKEFCVSSCTHLNGSHFHGPKQIIFHIGHGSLPS PGILVSKNLFKLKLPPGLSTIVVTSHDSSVYGLSMDDYNVAVPVENNDAYVTVIEDLYLGHQQSFVSTGRLMTLWEIWTP VLSGKHSPKMYMENTDFSLNFQLNNGGIEFTDKYMAFVESPSEARDQMRSLPPRFLGHKLVVGSSDELYQQVAEEIYIKA LSSVTDKKSFHIAFSGGTTPIPLYRALVTFFPNFPWTRTHIWQVDERCVLPTNSKSNFKVMETELLQKINIPYHNVHSMP VFLAGEICSGRGVKLYRDDLTFHLINNSFDLVVLGVGSDGHTASLFPRSSLLDDSDSLVTLTSDEASPRRLTLSYKIINK SKFVIAIVTGKSKHDIVEKLSEETKSKYDYPILGVNPTLGNMTFFIDNDAWFGE |
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