Gene
| Gene Model ID | pfu_aug1.0_4868.1_16541 |
|---|---|
| Locus | scaffold4868.1 : 77466 ... 96277 : + |
| To GenomeBrowser | scaffold4868.1:77466..96277 |
| Genes list of scaffold | scaffold4868.1 |
| Synonym | pfu_aug2.0_238.1_27096 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4868.1_16541.t1 | gi|326679884|ref|XP_002663893.2| | PREDICTED: calpain-15 isoform X2 [Danio rerio] | 4.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 4 |
Transcript
| Transcript ID | pfu_aug1.0_4868.1_16541.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4868.1_16541.t1 atgcaaggtattccttttgttgacaacgatttcccagaccctgatggacctgatgggggaagagatgacgtcgaatggct aagagttaaggacatcaaactgggaaaatatcagggaatggtcgtttatgatgagtcatcatcaaagcagaatgttctgc aaggagagctggccgattgctgtttgataaagctgagaaatccttggtctgtacataatctagataaatgcttgctcaat gccgaggaagactttatcgaactgattaagaccaaacttcacactgatgaacaagaattctggattacactggatgatct actcgggtattttgtaagcttgggcatttgtaatgttcgagaacaatggtttgaaatgagggttaaaggatccctacccc cagtatttgacaagccttggaaatatgtcacgtttagtgtacatcgtgaaacacaacttgatgtggagttatttcagagg aatttaagagtcctgctgaacaagtttattcatagtattcatgaagcatcagtgtttttgtatttaatatcgtatatccg aggccgatctggtactgaggattttaatgacctgctgattgtagttgcacagaattccctcaccgaggatcgagcaccgt acataaagcagccgctattcatgagagtgatgggccacagtcagaggagggctcgaagcttcgttagctgtgattgtgtg ctggaggagggtagctacactgtagcttgtcttggattttggcagttacaatatggtaaagaaaacatgacggcagagga aagtttgaaatggaataaagaatttaatctcgttctccatagctcacatgacctgactgggccagaggaagttgatattt ctagacctcattttaagcttttggaatatgccccttccgatttactcattttgctgacaaagcagcttgcttctgaaaag acagacagtcagactgacagacgagtatcagaactacacaagaggggacaaataggtttgccgctgtcggtcggtcggtc tgtcggtatgtcggtcggtccacgacatcagtttccgttcaatatctctggaatggattcacatattgaaatgaaatttt gtatacagacacatcatacaaaaatctag |
|
Protein
| Protein ID | pfu_aug1.0_4868.1_16541.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4868.1_16541.t1 MQGIPFVDNDFPDPDGPDGGRDDVEWLRVKDIKLGKYQGMVVYDESSSKQNVLQGELADCCLIKLRNPWSVHNLDKCLLN AEEDFIELIKTKLHTDEQEFWITLDDLLGYFVSLGICNVREQWFEMRVKGSLPPVFDKPWKYVTFSVHRETQLDVELFQR NLRVLLNKFIHSIHEASVFLYLISYIRGRSGTEDFNDLLIVVAQNSLTEDRAPYIKQPLFMRVMGHSQRRARSFVSCDCV LEEGSYTVACLGFWQLQYGKENMTAEESLKWNKEFNLVLHSSHDLTGPEEVDISRPHFKLLEYAPSDLLILLTKQLASEK TDSQTDRRVSELHKRGQIGLPLSVGRSVGMSVGPRHQFPFNISGMDSHIEMKFCIQTHHTKI |
|