Gene
| Gene Model ID | pfu_aug1.0_4882.1_23678 |
|---|---|
| Locus | scaffold4882.1 : 17386 ... 33722 : + |
| To GenomeBrowser | scaffold4882.1:17386..33722 |
| Genes list of scaffold | scaffold4882.1 |
| Synonym | pfu_aug2.0_517.1_24127 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4882.1_23678.t1 | 2 | 1 | WD40 | 98 | 112 | 3.7e-06 | 26.5 | 0.018 | 130.0 | 2.6 |
| pfu_aug1.0_4882.1_23678.t1 | 2 | 2 | WD40 | 147 | 183 | 3.7e-06 | 26.5 | 4.6e-08 | 0.00034 | 20.3 |
| pfu_aug1.0_4882.1_23678.t1 | 1 | 1 | AAA | 270 | 351 | 6.0e-10 | 39.4 | 1.3e-13 | 9.5e-10 | 38.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4882.1_23678.t1 | gi|291242722|ref|XP_002741255.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4882.1_23678.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4882.1_23678.t1 atgtatgctacatgtcaccatgacaacgtggtcaacttgatttctaataagttcaagcttctacaagtgtaccaaggact aacagttggtcaccttgttcaccagaagaggaaccgtacaccgtgtggtttacttcaagatccccgtacaaaagctctgg ttactaacggcaaacccggtcatcttcagttctacttggtagacagtgacaaacaactgtataatcttgatattgtttgt gaaaattacatttctcctgagaatttaaaacgaccaacagttgtaacagaggtcacaaatgctgcattcagctccaatgg tcactggctcgcgacgttacagctgtgggataacggagttatgtcccctgaaatgatccttaaattctggttctacaatg aggaaacacaaagttttatgttgaatacaatggttgacacgccccattcagctcctgtgaattctttgaaattccgcccc tacaatcctgaaattccggcctcaccgatggttgtcacatcaagtcaggatgggaaattcaagtgctgggttctaactga tgacacagatatttatcaaaatgcactaccagttgcttcagatccagtttaccacgttgaaatatgtcaaaatccaaaca ggttagaattgaacattttaaatatttcatataagctagaaaattccaaatttggcccctgcccctgtccggaaatacct agtgacagccctacgtcatttaacaactgtgatattgattcaacctgcttactttgtgcagatgaacctgaaacattaat gaagatcaacaatctcattctacagagtggtaagctggtgatgaagatgtttcagaagatacaggagttaatagatgatc ctgacgccttggtctttgttctcatagatgaggtggagagtttaacagcagccaggaaaagttcaatgtctggttctgac ccttctgatgccattagagtcgtgaacgctttactcactcagctagatcagattaaaagatttcctaatgtgatgatcct gaccacctctactgtcctgttcactaattccagagcaccctgttttctctaa |
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Protein
| Protein ID | pfu_aug1.0_4882.1_23678.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4882.1_23678.t1 MYATCHHDNVVNLISNKFKLLQVYQGLTVGHLVHQKRNRTPCGLLQDPRTKALVTNGKPGHLQFYLVDSDKQLYNLDIVC ENYISPENLKRPTVVTEVTNAAFSSNGHWLATLQLWDNGVMSPEMILKFWFYNEETQSFMLNTMVDTPHSAPVNSLKFRP YNPEIPASPMVVTSSQDGKFKCWVLTDDTDIYQNALPVASDPVYHVEICQNPNRLELNILNISYKLENSKFGPCPCPEIP SDSPTSFNNCDIDSTCLLCADEPETLMKINNLILQSGKLVMKMFQKIQELIDDPDALVFVLIDEVESLTAARKSSMSGSD PSDAIRVVNALLTQLDQIKRFPNVMILTTSTVLFTNSRAPCFL |
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