Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_48876.1_41455
Locus scaffold48876.1 : 1 ... 4395 : -
To GenomeBrowser scaffold48876.1:1..4395
Genes list of scaffold scaffold48876.1
Synonym pfu_aug2.0_653.1_11043

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_48876.1_41455.t1 gi|304651497|gb|ADM47611.1| Creb3L3 [Paracentrotus lividus] 2.0e-21

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_48876.1_41455.t1
Definition-
>pfu_aug1.0_48876.1_41455.t1
tacatgtcgactcgctgatattgccaccaacaccccccggtagcagttcctccagtgatagcgagggtagtcagagtccg
cagcgatcggctccttccagtcctatacgacagttacccatcacacgtcattatacatccacatcaccctcatctcataa
accttactcacaaccactattcacaaatcccataccccaatcaggagtgctaattttaacagaagaagagaaaagaacat
taatatcagaaggttacccagttcctaccaagcttcctctgaccaaacaagaagagaaaaacctgaaaaaaatcaggcga
aaaattaaaaataag

Protein
Protein IDpfu_aug1.0_48876.1_41455.t1
Definition-
>pfu_aug1.0_48876.1_41455.t1
HVDSLILPPTPPGSSSSSDSEGSQSPQRSAPSSPIRQLPITRHYTSTSPSSHKPYSQPLFTNPIPQSGVLILTEEEKRTL
ISEGYPVPTKLPLTKQEEKNLKKIRRKIKNK

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