Gene
| Gene Model ID | pfu_aug1.0_491.1_43709 |
|---|---|
| Locus | scaffold491.1 : 64576 ... 74626 : + |
| To GenomeBrowser | scaffold491.1:64576..74626 |
| Genes list of scaffold | scaffold491.1 |
| Synonym | pfu_aug2.0_556.1_20901 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_491.1_43709.t1 | 1 | 1 | RVT_1 | 381 | 541 | 8.5e-26 | 90.6 | 5.0e-29 | 1.5e-25 | 89.8 |
Transcript
| Transcript ID | pfu_aug1.0_491.1_43709.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_491.1_43709.t1 atgcaacgtcaaggtgccaaagaaattgaaaacgagtgtttacattcagttactacggcaacacaaacagatgttgtgaa gcacttgaagtatctctctagtgtcggtcagaacagtgatcatgttacgataaaaggtgaacgcggaatgaagctaaaag ggctaattgaagggacgccactggagtggaaattagatactggtgctatcaattcatttatcacggaggatgtgtattac agcattcccgaggaacaaagacctgtgcttgagcgcgcgaaaaagacatttcaagctgcaaatgggaacaatttgaatgt gcttggagctactaaaatgttaatttcattttctggatttaatgtgatttttcgtgtatttgttggaggagtgaatacaa acctgttaggattagactttatcacacgatatcagtgtcattgggattacagtacagactcctgcatcctgaaaagtcta ccggaagatagtgaatcgtgtttgcgcggctgtatggtttatagtactgagaagtgtgctatacccccgtgtcatgaagc tgtaatcaaagcaagggtggatcaaaaagtaaaatcttgtgatggaattcttgtgccgttgaagaagtttattcttgaac atggattaattgttgcacgtgtgcttgtgagaataaatgcagacgaggagtgtatttatttgcgcgtgttaaatccgaat gactatcatgtgcatgtgcgtgaaaacacagtgatggcgttgtttgaacccgttaatttcatatcgtcatcaaatgtgcc tgaggtgtgcagcgttgatgtgaatatgaagaaggaattaccagatttccttgagtctacattcattgaaggatgtaaac atttaacggaggggcagatagaagaattccgagattttatgattcgccgaagagatgctttcgccgacccacgtaaagcg gcagagcgtgctaatattggagaacatttcattaaattgaaggaggaagtaccgtttaaggaaccagtgcgcagggttcc catattcaagcgtgaaataatggatagtgagatccaaaagcttgaagagcaggggctaattgagaagtcaaatagcccat ggtcgtctccccttgttttagttcagaagaaagacaagagttggagactttgcgttgattacaggaaattaaatgcaaac acagtgaaggatgcctaccctataccccgtgtagcagatgacctcgattctctcgcaggagcaaagtggttttcgtcatt agatctaaacatggcttatcaccagattcccatgcacgagaaggataaggagaagacagcgtttgctactccccgtggtg gactgtaccaatacacagtaatgccgttcggattatgcaatgcaccggcgacgttccagcgggtgattgaaaaagtcttg agcggattacaatggcgcatatctgtattatatctggatgatatcatagtgtacagtcgtgattttaaatctcatttgga aaacttagacatggtgatcgatagacttcagaaagcaaatttgaaattaaaagcgaaaaagtgtcagttactaaaacagg aagtaagtttcttaggacacattgtatcacaggaaggagttaaaacagacccttctaaaatcactgttgtgaaagagtgg aaaacgccaagaaacgcgtcagaacttcggagttttctaggacttgctacatattatagacgattcattaaagattttgc aaagattgcgaaatgcttgcatgcacttacaggaaaaaggagtgtatggaattggacaagtgaatgtgacgaggcctttc agttactaaaggctaaacttgtgacatcacctattcttggatacccggatgttcatggcggcgaattcattttagataca gacgccagtaacgattcaattggatgtgtgctatcgcaaaatataggcgacaaggaaattgtgatatcgtacggaagtcg tgtgttgacaaattcagagagaaattattgcgtaacgcgcaaggaaatgctcgcggttgtgtactttataaaacacttta agcattacttgcttggaagagaatttctgttacgtacagatcatggatcgcttgtgtggctacacaaaatgaaggaaccg gaaggacaaatggcaagatggctacagcagttagggccatatgtattccgaattcaacatcgacctggaaagcggcatag taatgcggacgctttatcaaggataccgatagactcaatttgtaaacagtgcaagcgaagtgtgcatagtgaatgtgatg tgattgagcgctattcacacataagtgaattgagaaatagtttgaaaatttctcaagtttgtgacagtgatgactttgcg ttgaataaactttttaacgaagcagaaaatatgagtttcaataattgtgcgccaatctcttcaacacgaaaaacaagagc aaacagaccgaatagagcgagagcgagaaaacaaccgacagaatcacttagttgtgaaaacatcagaaaacatcaaataa atgacaatggaatgtgtttaatttttcgttggcttgagaagtgcgaaaaacctcccttatcagtgattacatgtgaaaat ttcgagtgcaagtttctttactcaagatgggatcttttgtgtattgatcgcggagtgttgtgtattcgatggatcgaaag cgacagagagacgttaaagatattcgtacctaagacgctgcgtgacgttattctatggcaattacacgatgcagaaagtg caggacacatgggtgcgaagagaactctcgcgaaggtgcgaaattctaattattactggccaaggatgcgacaaagtgtg aatgaccatgtgttatcttgtgatatatgtgaggaacggaaggccccatctaggaagaaaagagcttacatgaaacaatt tcttagtggtgaaccttttgaacgagtgggaatcgatattgcgggaccttttccgaaatctagcaagggatacttataca tattagtggtagcagattatttta |
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Protein
| Protein ID | pfu_aug1.0_491.1_43709.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_491.1_43709.t1 MQRQGAKEIENECLHSVTTATQTDVVKHLKYLSSVGQNSDHVTIKGERGMKLKGLIEGTPLEWKLDTGAINSFITEDVYY SIPEEQRPVLERAKKTFQAANGNNLNVLGATKMLISFSGFNVIFRVFVGGVNTNLLGLDFITRYQCHWDYSTDSCILKSL PEDSESCLRGCMVYSTEKCAIPPCHEAVIKARVDQKVKSCDGILVPLKKFILEHGLIVARVLVRINADEECIYLRVLNPN DYHVHVRENTVMALFEPVNFISSSNVPEVCSVDVNMKKELPDFLESTFIEGCKHLTEGQIEEFRDFMIRRRDAFADPRKA AERANIGEHFIKLKEEVPFKEPVRRVPIFKREIMDSEIQKLEEQGLIEKSNSPWSSPLVLVQKKDKSWRLCVDYRKLNAN TVKDAYPIPRVADDLDSLAGAKWFSSLDLNMAYHQIPMHEKDKEKTAFATPRGGLYQYTVMPFGLCNAPATFQRVIEKVL SGLQWRISVLYLDDIIVYSRDFKSHLENLDMVIDRLQKANLKLKAKKCQLLKQEVSFLGHIVSQEGVKTDPSKITVVKEW KTPRNASELRSFLGLATYYRRFIKDFAKIAKCLHALTGKRSVWNWTSECDEAFQLLKAKLVTSPILGYPDVHGGEFILDT DASNDSIGCVLSQNIGDKEIVISYGSRVLTNSERNYCVTRKEMLAVVYFIKHFKHYLLGREFLLRTDHGSLVWLHKMKEP EGQMARWLQQLGPYVFRIQHRPGKRHSNADALSRIPIDSICKQCKRSVHSECDVIERYSHISELRNSLKISQVCDSDDFA LNKLFNEAENMSFNNCAPISSTRKTRANRPNRARARKQPTESLSCENIRKHQINDNGMCLIFRWLEKCEKPPLSVITCEN FECKFLYSRWDLLCIDRGVLCIRWIESDRETLKIFVPKTLRDVILWQLHDAESAGHMGAKRTLAKVRNSNYYWPRMRQSV NDHVLSCDICEERKAPSRKKRAYMKQFLSGEPFERVGIDIAGPFPKSSKGYLYILVVADYF |
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