Gene
| Gene Model ID | pfu_aug1.0_4913.1_16552 |
|---|---|
| Locus | scaffold4913.1 : 25306 ... 28593 : + |
| To GenomeBrowser | scaffold4913.1:25306..28593 |
| Genes list of scaffold | scaffold4913.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4913.1_16552.t1 | 2 | 1 | zf-B_box | 22 | 67 | 4.7e-08 | 32.7 | 1.6e-07 | 0.00034 | 20.4 |
| pfu_aug1.0_4913.1_16552.t1 | 2 | 2 | zf-B_box | 81 | 111 | 4.7e-08 | 32.7 | 9.2e-07 | 0.002 | 18.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4913.1_16552.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4913.1_16552.t1 atggcatccgcgttagacgaggagcccaataaccagttggttttagcaaagacgaaactagaacttttgtgtgatgtttg tatagaggaacccctcgtggccgtctatcactgtgtggagtgcgaccagaactactgtgagaactgtgagtctatacacg gggcgatgaagatgacaaaggatcataaaatagtgatgatagaggacggggttgtaacagacaaacccaaagaccatata tgtggtaagaacaagagttatctctactgtggtatatgtaaccgtattatatgctccaagtgtgtgagaaggttacatcg tcgtcatgggatccacgtgccccagccctcctccccccaccccgccatatcgggtaacctcaggactatgctacagtcaa agctagaatattacgaacaacaaatgaggaaagttgaaccagaaaccaacatcaaagttcaactcctcagacaaaaggcc aatgagttgaaagcggaagttgacgtcatccacaaggaggcgatggatgaaatcaaagaaatagagcgggaaaatgttca aaaactagaggattacaaagagaaactggtgcagaagaaaaaccgttatgacgagagactggtagaactcagagataatg tcgagttactgaacgatgatagtattgaagaattcaaagttaaggcccaagaggaagtagaaatcttacttaaccctgag gaaccgaggcctgtgacccgcacattcagttcaagcaaatatgaagaaaagtttttagcacttaaagatagactaacaaa gagttttgacgattttgctgcccaaataggcatatcatcctctgataaaaagaagaaaaangaagtcaaaagcctaaacc gaaattttcttaacaacagagctaatcaagttttgaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_4913.1_16552.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4913.1_16552.t1 MASALDEEPNNQLVLAKTKLELLCDVCIEEPLVAVYHCVECDQNYCENCESIHGAMKMTKDHKIVMIEDGVVTDKPKDHI CGKNKSYLYCGICNRIICSKCVRRLHRRHGIHVPQPSSPHPAISGNLRTMLQSKLEYYEQQMRKVEPETNIKVQLLRQKA NELKAEVDVIHKEAMDEIKEIERENVQKLEDYKEKLVQKKNRYDERLVELRDNVELLNDDSIEEFKVKAQEEVEILLNPE EPRPVTRTFSSSKYEEKFLALKDRLTKSFDDFAAQIGISSSDKKKKXEVKSLNRNFLNNRANQVLK |
|