Gene
| Gene Model ID | pfu_aug1.0_4930.1_52403 |
|---|---|
| Locus | scaffold4930.1 : 10910 ... 34725 : - |
| To GenomeBrowser | scaffold4930.1:10910..34725 |
| Genes list of scaffold | scaffold4930.1 |
| Synonym | pfu_aug2.0_113.1_10301 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4930.1_52403.t1 | 2 | 1 | DZF | 334 | 362 | 0.0 | 185.9 | 0.65 | 9600.0 | -4.4 |
| pfu_aug1.0_4930.1_52403.t1 | 2 | 2 | DZF | 388 | 624 | 0.0 | 185.9 | 0.0 | 0.0 | 184.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4930.1_52403.t1 | gi|291241127|ref|XP_002740468.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4930.1_52403.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4930.1_52403.t1 atggcacactttgtgtatccagcagccaatgcccagcctgcagcagcttaccctgctgtacagacagcttatgtggcagc agctccacaggcggcatatgccacagctgctccacgagctggacaggcctatgacagctaccaaacggcacatgccactc cacagtatgcctataccacacgcactcaagttgctgtaacgcccgcagcaacatatgaccagaaagcttactatcagcct gcggcagcagccgcagcggcagtagcagctcaagctggagccacatactctgtggcagagactcattatcatgcagccaa gccagcttactcaacgggaacaacttatcaaacaacacagcgggcagtgactacgcccaaaagtcatacccctgtccagg gggcagtgtccagtgctgccacctacgtgtatccagcatcaaacgtgactcagcctgtgacgtcatacacaacaacatcc tatgccaacacaacaactcctaccacaacatatacaggcaaagctaacactggtgtcaccaactacacatcatataagca gacggtacagccggtagttattaaagacaaatctgacagtgaggacaacctcaacattttgggagaaaaagatgtcactc ctgttggtgcaccgggatattttcgtttccaatacgtaccgtggatggaagaggagttatattgggaggagaggagaaga tacgaggagctggagtattatgaatggcagaggagccagggtcgacctggtatacctccaccaagacctttcccacatgg acctggacctatgggtatgagaagaccagattcctctgatgacagacatgtaatgtctaaacatgccagtatatatccaa atgaagctgagcttcaggctgttcagaacattgtgtcactgtgtgagaaatccttgaaaaatgtgtcagatttcctggca gaaagtgatatgccaaaggcaatggatgttgataagaaagaggttaaaaaagaagttgttataaagaaagaagggacagc caagaaggagacaactcctacgaagaaggaagccactacacctgccaagaaagacactgataacaaagaaggggagaaga aggaagagccagctgtacagcgtgtattgaagggtgtaatgagagtgggtgtacttgccaagggcctgttactgcacgga gatctgaatgtccatcttgttgtactgtgctcggagaaaccaactcgtactctgttagaacgtgtagctgatgccttgcc aaaacagattgctgctatcacagaagagaaatatgaggtgaagcgctgtgtggaagaggccgccatcatcgtcaccagcg ataaacagccacagacttcatgtactgtaactctgacatcaccagtaatgagggagcaacaaacggaaggagaaacagtg accgtcaaagaccctccggatgtactggacaggcagaaatgcctcgatgctctggcagcgttacggcatgctaaatggtt ccaggttcgatactctttcttcttacactactttgcagccttatggtgttcatatttgtattatcttattgaacaggcca tggagcttcttgttgagaagtgtgtgagtagtggaggaaccaatatgagccctggtgatgccctacgcagagtgtttgaa tgtatatcatctggattacttctaccaggtggtccaggattatatgatccatgtgagaaggatcccacagatgctgcctc ctcactgaccaatcaggagagagaagacatcactgcttcagctcagcatgctctgaggttgatagctttccgtcagatac ataaagttttgggcatggacccactgccaacacccaaacatctacgacaaaggatgaatccccgtaaacgtaggcgtgcg gacagcagtactggagagggcgatgatgcaggagaaaagaaagacaagaaagaagatgaaatggaaacaagtgacaaata g |
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Protein
| Protein ID | pfu_aug1.0_4930.1_52403.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4930.1_52403.t1 MAHFVYPAANAQPAAAYPAVQTAYVAAAPQAAYATAAPRAGQAYDSYQTAHATPQYAYTTRTQVAVTPAATYDQKAYYQP AAAAAAAVAAQAGATYSVAETHYHAAKPAYSTGTTYQTTQRAVTTPKSHTPVQGAVSSAATYVYPASNVTQPVTSYTTTS YANTTTPTTTYTGKANTGVTNYTSYKQTVQPVVIKDKSDSEDNLNILGEKDVTPVGAPGYFRFQYVPWMEEELYWEERRR YEELEYYEWQRSQGRPGIPPPRPFPHGPGPMGMRRPDSSDDRHVMSKHASIYPNEAELQAVQNIVSLCEKSLKNVSDFLA ESDMPKAMDVDKKEVKKEVVIKKEGTAKKETTPTKKEATTPAKKDTDNKEGEKKEEPAVQRVLKGVMRVGVLAKGLLLHG DLNVHLVVLCSEKPTRTLLERVADALPKQIAAITEEKYEVKRCVEEAAIIVTSDKQPQTSCTVTLTSPVMREQQTEGETV TVKDPPDVLDRQKCLDALAALRHAKWFQVRYSFFLHYFAALWCSYLYYLIEQAMELLVEKCVSSGGTNMSPGDALRRVFE CISSGLLLPGGPGLYDPCEKDPTDAASSLTNQEREDITASAQHALRLIAFRQIHKVLGMDPLPTPKHLRQRMNPRKRRRA DSSTGEGDDAGEKKDKKEDEMETSDK |
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