Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4931.1_30821
Locus scaffold4931.1 : 62696 ... 67576 : +
To GenomeBrowser scaffold4931.1:62696..67576
Genes list of scaffold scaffold4931.1
Synonym pfu_aug2.0_557.1_24179

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4931.1_30821.t1 1 1 IPPT 1 77 4.0e-22 78.4 2.9e-26 4.3e-22 78.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4931.1_30821.t1 gi|348542152|ref|XP_003458550.1| 3.0e-24

Transcript
Transcript IDpfu_aug1.0_4931.1_30821.t1
Definition-
>pfu_aug1.0_4931.1_30821.t1
atgcagatatacaaaggattggacattgtaaccaacaaagtgaccagagaagaactacagcaatgccctcatcatatgat
tgattatgtctctccactacaggaaaaacacaccattgtggagttcagagacaaagctgtccctattatcaacaatttac
tacagagaaagattctacctatcatagtgggaggtaccaactactatatagaggccttactctacaacttccttctaagc
cagaatgtaagtatatattaa

Protein
Protein IDpfu_aug1.0_4931.1_30821.t1
Definition-
>pfu_aug1.0_4931.1_30821.t1
MQIYKGLDIVTNKVTREELQQCPHHMIDYVSPLQEKHTIVEFRDKAVPIINNLLQRKILPIIVGGTNYYIEALLYNFLLS
QNVSIY

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