Gene
| Gene Model ID | pfu_aug1.0_4931.1_30822 |
|---|---|
| Locus | scaffold4931.1 : 74866 ... 79045 : + |
| To GenomeBrowser | scaffold4931.1:74866..79045 |
| Genes list of scaffold | scaffold4931.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4931.1_30822.t1 | 1 | 1 | IPPT | 14 | 120 | 1.2e-11 | 44.1 | 1.1e-15 | 1.6e-11 | 43.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4931.1_30822.t1 | gi|350397955|ref|XP_003485043.1| | PREDICTED: tRNA dimethylallyltransferase, mitochondrial isoform X1 [Bombus impatiens] | 2.0e-34 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4931.1_30822.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4931.1_30822.t1 atgatttgtatggtgtaccaatgtgtgatatataattacagggccttagtggtgtatgatatgcatggtgtaccaatgag tgaagcattcaaagcccagaaaatagaccaggactccaaacgtggaccattgaggtacaaagatgtctgtgtgttctggg tacagagtgacatgaaagttctaggtgagaggatagacaaacgtacagatgggatgattgatcgaggactgattcaagaa ctattagattttcaccagcaatataatgtgagcagaattcaagaaaacaaagaagtggattacacacatgggatttttca gagcatcggatttaaggaattccatgagtaccttatcatgtctgaagatgagagacagtctgaggcaggacaaaatttgc tgaaaaaaagtaaagacactttcaaaataaggttttggccaatcacattactcttttgtatagtaccggtattttaccca cttaacacaataaatgatgtcatggcttgctatgttttggagatacatgtactgtga |
|
Protein
| Protein ID | pfu_aug1.0_4931.1_30822.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4931.1_30822.t1 MICMVYQCVIYNYRALVVYDMHGVPMSEAFKAQKIDQDSKRGPLRYKDVCVFWVQSDMKVLGERIDKRTDGMIDRGLIQE LLDFHQQYNVSRIQENKEVDYTHGIFQSIGFKEFHEYLIMSEDERQSEAGQNLLKKSKDTFKIRFWPITLLFCIVPVFYP LNTINDVMACYVLEIHVL |
|